RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 GINS4Q9BRT9 223 aa14.39□□□□□ -0.11
CACNA1A-235ENST00000637004 PCDHGA5Q9Y5G8 931 aa14.39□□□□□ -0.11
CACNA1A-235ENST00000637004 PRKRAO75569 313 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 CLEC3AO75596 197 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 CSNK2A2P19784 350 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 PTNP21246 168 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 DNAAF1Q8NEP3 725 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ST8SIA2Q92186 375 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 GCDHQ92947 438 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 OR52A5Q9H2C5 316 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 IL36AQ9UHA7 158 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF443Q9Y2A4 671 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ACOT7O00154 380 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 LEFTY2O00292 366 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ERGP11308 486 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 HOXA1P49639 335 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ACTA2P62736 377 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ACTG2P63267 376 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 DEFA5Q01523 94 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 IL10RAQ13651 578 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 GRM7Q14831 915 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 SHHQ15465 462 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 POM121L1PQ3SYA9 428 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 RANBP3LQ86VV4 465 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF547Q8IVP9 402 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 CDK20Q8IZL9 346 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 HDDC3Q8N4P3 179 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 PXT1Q8NFP0 134 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 OR6K3Q8NGY3 331 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 OR4C6Q8NH72 309 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 HMGB4Q8WW32 186 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 CNRIP1Q96F85 164 aaPredicted RBP14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 ENKD1Q9H0I2 346 aa14.38□□□□□ -0.11
CACNA1A-235ENST00000637004 TRAPPC13A5PLN9 417 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 IFITM5A6NNB3 132 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 KPNA3O00505 521 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 RPN2P04844 631 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 RAB40ALP0C0E4 278 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF3P17036 446 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MPIP34949 423 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MAT1AQ00266 395 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 FGL1Q08830 312 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TMEM35AQ53FP2 167 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TMEM69Q5SWH9 247 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TCEAL8Q8IYN2 117 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 C1orf216Q8TAB5 229 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 RAB40AQ8WXH6 277 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TFGQ92734 400 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 IGSF21Q96ID5 467 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 OR14A2Q96R54 314 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MRI1Q9BV20 369 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MTHFD2LQ9H903 347 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PURGQ9UJV8 347 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF223Q9UK11 482 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 GPR34Q9UPC5 381 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 DUXAA6NLW8 204 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 F5H5P2 479 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 H7C2Y5 167 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 FCMRO60667 390 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PRAMEF2O60811 474 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 CD1AP06126 327 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SLC2A5P22732 501 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 FAUP35544 74 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SIRPAP78324 504 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 LGALS3BPQ08380 585 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ILF3Q12906 894 aaKnown RBP eCLIP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 RAB33AQ14088 237 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TP53I3Q53FA7 332 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 HEPHL1Q6MZM0 1159 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF793Q6ZN11 406 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SPRED2Q7Z698 418 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TMEM17Q86X19 198 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SYS1Q8N2H4 156 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ADAMTS15Q8TE58 950 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ORAI1Q96D31 301 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 WDR89Q96FK6 387 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 TRMT61BQ9BVS5 477 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ACTRT3Q9BYD9 372 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 EXOSC3Q9NQT5 275 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PLCL2Q9UPR0 1127 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 SLC6A5Q9Y345 797 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 LRIT2A6NDA9 550 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PPM1DO15297 605 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 CBX7O95931 251 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 CTSLP07711 333 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MYOGP15173 224 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 IL9P15248 144 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MAKP20794 623 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 NOS3P29474 1203 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 MC3RP41968 323 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 GPR1P46091 355 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PTH2RP49190 550 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 PDX1P52945 283 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 AGERQ15109 404 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 ZNF750Q32MQ0 723 aa14.37□□□□□ -0.11
CACNA1A-235ENST00000637004 EIPR1Q53HC9 387 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms