RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PSPHP78330 225 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 SLC35F1Q5T1Q4 408 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 ARHGDIGQ99819 225 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 TAPBPLQ9BX59 468 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CUTCQ9NTM9 273 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PLCXD1Q9NUJ7 323 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 FTSJ1Q9UET6 329 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 MGAT4BQ9UQ53 548 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CLDN16Q9Y5I7 305 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 ALG5Q9Y673 324 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 OSMP13725 252 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 SKP1P63208 163 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 HSD11B2P80365 405 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 FOXK1P85037 733 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CSTF1Q05048 431 aaKnown RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 LARS2Q15031 903 aaKnown RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 TCTE1Q5JU00 501 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 HES5Q5TA89 166 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 C1orf189Q5VU69 101 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CYB5R2Q6BCY4 276 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PTCHD4Q6ZW05 846 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PLXDC1Q8IUK5 500 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 FAM181AQ8N9Y4 354 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 OR1L3Q8NH93 324 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PCNPQ8WW12 178 aaKnown RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 CCDC74AQ96AQ1 378 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 ZNF285Q96NJ3 590 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 DGAT2Q96PD7 388 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 ZNF350Q9GZX5 532 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CACYBPQ9HB71 228 aaKnown RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 GNSP15586 552 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 EMDP50402 254 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 EPHA4P54764 986 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PSG6Q00889 435 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 MAP4K2Q12851 820 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 TATDN3Q17R31 274 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CREB3L2Q70SY1 520 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 BCDIN3DQ7Z5W3 292 aaKnown RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 ZNF619Q8N2I2 560 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 C9orf62Q8N4C0 152 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 MORN4Q8NDC4 146 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 POC1BQ8TC44 478 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 FRMD6Q96NE9 622 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 DUSP22Q9NRW4 184 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CNIH4Q9P003 139 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 A0A1B0GTQ1 180 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 CCDC182A6NF36 153 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZAR1LA6NP61 321 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 SYT5O00445 386 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 SEC14L5O43304 696 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 THY1P04216 161 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 CFIP05156 583 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 HOXC12P31275 282 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 STARP49675 285 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 FOXL2P58012 376 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 CDC42P60953 191 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZXDAP98168 799 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ST3GAL4Q11206 333 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 MRPL2Q5T653 305 aaKnown RBP10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZNF730Q6ZMV8 503 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZNF767PQ75MW2 155 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZNF595Q8IYB9 648 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 PTCHD1Q96NR3 888 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 FOLH1BQ9HBA9 442 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 PNO1Q9NRX1 252 aaKnown RBP10.6□□□□□ -0.71
CLN6-217ENST00000636964 B3GNT2Q9NY97 397 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 SLC35F4A4IF30 521 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ARRDC5A6NEK1 342 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 RRP8O43159 456 aaKnown RBP10.6□□□□□ -0.71
CLN6-217ENST00000636964 GMDSO60547 372 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 FAM157BP0CG42 384 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 HLA-DMAP28067 261 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 RRM2BQ7LG56 351 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 RCBTB1Q8NDN9 531 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 DIO2Q92813 273 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 FAM46AQ96IP4 442 aaKnown RBP10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZC3H10Q96K80 434 aaKnown RBP10.6□□□□□ -0.71
CLN6-217ENST00000636964 SLC22A4Q9H015 551 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 RAB33BQ9H082 229 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 LINC00862A6NCI5 91 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 PATE3B3GLJ2 98 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ZNF749O43361 778 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 LAMTOR5O43504 91 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 SNAPINO95295 136 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 IGKV1D-16P01601 117 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 HK1P19367 917 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 PMS2CLQ68D20 193 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 GUSBP11Q6P575 273 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 BMPERQ8N8U9 685 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 TMEM255BQ8WV15 326 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 STACQ99469 402 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 ASPNQ9BXN1 380 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 EGLN3Q9H6Z9 239 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 NIPAL2Q9H841 368 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 HHATLQ9HCP6 504 aa10.6□□□□□ -0.71
CLN6-217ENST00000636964 KLHL21Q9UJP4 597 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms