RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 FOXF2Q12947 444 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 EFR3AQ14156 821 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 SPDYE7PQ495Y7 208 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 TRMT12Q53H54 448 aaKnown RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 KDM4DQ6B0I6 523 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 ALDH16A1Q8IZ83 802 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 SETD9Q8NE22 299 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 PIK3C3Q8NEB9 887 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 ZNF675Q8TD23 568 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 GEMIN6Q8WXD5 167 aaKnown RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 HDAC2Q92769 488 aaKnown RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 INTS12Q96CB8 462 aaKnown RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 CNRIP1Q96F85 164 aaPredicted RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 ZNF681Q96N22 645 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 AMBRA1Q9C0C7 1298 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 RBM38Q9H0Z9 239 aaKnown RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 SLC35C2Q9NQQ7 365 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 SIRT3Q9NTG7 399 aaPredicted RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 CLCF1Q9UBD9 225 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 NDRG3Q9UGV2 375 aa11.39□□□□□ -0.59
CTSD-208ENST00000636843 GPR55Q9Y2T6 319 aaPredicted RBP11.39□□□□□ -0.59
CTSD-208ENST00000636843 EXPH5Q8NEV8 1989 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 TMEM247A6NEH6 219 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 TMEM229AB2RXF0 380 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 C5orf58C9J3I9 102 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 CASKO14936 926 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 AHCYL1O43865 530 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 REM1O75628 298 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 FESP07332 822 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 CD53P19397 219 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 GSTT1P30711 240 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 TTKP33981 857 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 RYKP34925 604 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
CTSD-208ENST00000636843 PCYT1AP49585 367 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 LHX2P50458 406 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 ANXA11P50995 505 aaKnown RBP11.38□□□□□ -0.59
CTSD-208ENST00000636843 DUSP2Q05923 314 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 PPP1R8Q12972 351 aaKnown RBP11.38□□□□□ -0.59
CTSD-208ENST00000636843 HSPB3Q12988 150 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 LTB4RQ15722 352 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 ZNF691Q5VV52 312 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 C6orf120Q7Z4R8 191 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 LUZP2Q86TE4 346 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 WFDC11Q8NEX6 87 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 SFXN5Q8TD22 340 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 TAMM41Q96BW9 452 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 MOAP1Q96BY2 351 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 SLC35A4Q96G79 324 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 BBS4Q96RK4 519 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 G6PC3Q9BUM1 346 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 PDP1Q9P0J1 537 aaPredicted RBP11.38□□□□□ -0.59
CTSD-208ENST00000636843 KIF17Q9P2E2 1029 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 BLOC1S6Q9UL45 172 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 HSPE1-MOB4S4R3N1 261 aa11.38□□□□□ -0.59
CTSD-208ENST00000636843 A8MXE2 369 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 DIRAS1O95057 198 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 CRHP06850 196 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 GPC1P35052 558 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 KRT20P35900 424 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 DAPP51397 102 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 CASP9P55211 416 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 CDH15P55291 814 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 BCL2A1Q16548 175 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 SHEQ5VZ18 495 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 FAHD1Q6P587 224 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 BHLHB9Q6PI77 547 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 CYP4Z1Q86W10 505 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 GRAMD2AQ8IUY3 354 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 RASSF5Q8WWW0 418 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 C18orf12Q96KH6 178 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 SLC35G5Q96KT7 338 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 SFXN2Q96NB2 322 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 AMDHD1Q96NU7 426 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 GLIPR2Q9H4G4 154 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 GIMAP4Q9NUV9 329 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
CTSD-208ENST00000636843 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 CCDC160A6NGH7 325 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 MSTNO14793 375 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 HCRTR2O43614 444 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 TSPAN2O60636 221 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 OPN1SWP03999 348 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 CT45A8P0DMV1 189 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 CT45A9P0DMV2 189 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 ZNF708P17019 499 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 IL12BP29460 328 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 RRM2P31350 389 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 STARP49675 285 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 NCBP2P52298 156 aaKnown RBP eCLIP11.36□□□□□ -0.59
CTSD-208ENST00000636843 PNLIPRP2P54317 469 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 CLDN18P56856 261 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 LTBQ06643 244 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 CT45A2Q5DJT8 189 aa11.36□□□□□ -0.59
CTSD-208ENST00000636843 ZNF628Q5EBL2 1059 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms