RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MCOLN1Q9GZU1 580 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 AIG1Q9NVV5 245 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SMOXQ9NWM0 555 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZCCHC11Q5TAX3 1644 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ARHGAP32A7KAX9 2087 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 FMN2Q9NZ56 1722 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 EIF3FO00303 357 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 YKT6O15498 198 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PRAMEF4O60810 478 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 MAFO75444 373 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 FLT3LGP49771 235 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 HERVK_113P61574 105 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NR0B2Q15466 257 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SMUG1Q53HV7 270 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TXNDC8Q6A555 127 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DGAT2L6Q6ZPD8 337 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TPRG1Q6ZUI0 275 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF573Q86YE8 665 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CLEC10AQ8IUN9 316 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SLC38A5Q8WUX1 472 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 LRTOMTQ8WZ04 291 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PDCD2LQ9BRP1 358 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 UTP23Q9BRU9 249 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NKX1-2Q9UD57 310 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PRR14LQ5THK1 2151 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 B4GALT4O60513 344 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DRD2P14416 443 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NTF3P20783 257 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PTAFRP25105 342 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DCTP40126 519 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CASP3P42574 277 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SULT1A2P50226 295 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TAS2R19P59542 299 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CSNK1G2P78368 415 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DUSP28Q4G0W2 176 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SOHLH1Q5JUK2 328 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PRAMEF20Q5VT98 475 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM244Q5VVB8 128 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SIAH1Q8IUQ4 282 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 SYT14Q8NB59 555 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 OR10G3Q8NGC4 313 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 GPR148Q8TDV2 347 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 GRAMD2BQ96HH9 432 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 DCBLD2Q96PD2 775 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 VAMP8Q9BV40 100 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 RIOX1Q9H6W3 641 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 APOBEC3BQ9UH17 382 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NUBP2Q9Y5Y2 271 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 GVINP1Q7Z2Y8 2422 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 RIMS1Q86UR5 1692 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 EME2A4GXA9 379 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PPP5D1E7EU14 171 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ARPC5O15511 151 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 BTN1A1Q13410 526 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 VGLL4Q14135 290 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 YIF1BQ5BJH7 314 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PRSS55Q6UWB4 352 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 UBE3DQ7Z6J8 389 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TECPR1Q7Z6L1 1165 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CMC1Q7Z7K0 106 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF738Q8NE65 137 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 FNDC8Q8TC99 324 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PAQR8Q8TEZ7 354 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CYB5D2Q8WUJ1 264 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 NT5C3BQ969T7 300 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM101Q96IK0 257 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 WDR61Q9GZS3 305 aaKnown RBP5.66□□□□□ -1.5
SCN1A-212ENST00000636194 C1orf198Q9H425 327 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 BCO1Q9HAY6 547 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CRLF2Q9HC73 371 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 PNPOQ9NVS9 261 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 ASIC5Q9NY37 505 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CD300AQ9UGN4 299 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 KLK4Q9Y5K2 254 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 USP32Q8NFA0 1604 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 CD163L1Q9NR16 1453 aa5.66□□□□□ -1.5
SCN1A-212ENST00000636194 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-212ENST00000636194 TRABD2BA6NFA1 517 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 FAM166BA8MTA8 275 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 MRPL33O75394 65 aaKnown RBP5.65□□□□□ -1.5
SCN1A-212ENST00000636194 NXPH2O95156 264 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 KCNJ3P48549 501 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 CACNG7P62955 275 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 KLRB1Q12918 225 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 IRF4Q15306 451 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 TEAD2Q15562 447 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 ATP6AP1Q15904 470 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 LBX2Q6XYB7 198 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 H2BFWTQ7Z2G1 175 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 IGFN1Q86VF2 1251 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 ARL14EPQ8N8R7 260 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-212ENST00000636194 ANKRD53Q8N9V6 530 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 OR2G2Q8NGZ5 317 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 TRUB1Q8WWH5 349 aaKnown RBP5.65□□□□□ -1.5
SCN1A-212ENST00000636194 MSLNLQ96KJ4 702 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 KCNJ15Q99712 375 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 MOB4Q9Y3A3 225 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 A0A0B4J2A0 478 aa5.65□□□□□ -1.5
SCN1A-212ENST00000636194 SLC22A23A1A5C7 686 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms