RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ZNF300Q96RE9 604 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 DCAF13Q9NV06 445 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 C17orf113A0A1B0GUU1 675 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 KITLGP21583 273 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PKLRP30613 574 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 YPEL5P62699 121 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CLDN10P78369 228 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SLC14A1Q13336 389 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 DYRK1AQ13627 763 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PODNL1Q6PEZ8 512 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 GAREM1Q9H706 876 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PRDM9Q9NQV7 894 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM45AQ9NWC5 275 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HHLA2Q9UM44 414 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 G3V3Y1 287 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PRICKLE3O43900 615 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 GMDSO60547 372 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 GALR3O60755 368 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 AOAHP28039 575 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HLA-DMAP28067 261 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF140P52738 457 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 TAZQ16635 292 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 COMMD7Q86VX2 200 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZNF480Q8WV37 535 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PRRT1Q99946 306 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 NTMT1Q9BV86 223 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 hCG_1809904A0A1W2PP81 198 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 A0A1W2PPE2 198 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 A0A1W2PR64 198 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 A0A1W2PRV1 198 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 GPR75O95800 540 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CARD18P57730 90 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 KEAP1Q14145 624 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 OR7E24Q6IFN5 339 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 MEPCEQ7L2J0 689 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ANKRD13BQ86YJ7 626 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HHIPL1Q96JK4 782 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HYLS1Q96M11 299 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 ZCWPW2A0A1B0GU75 182 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 EGFP01133 1207 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HOXD9P28356 352 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 TM4SF4P48230 202 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 HOXA1P49639 335 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 DCAF7P61962 342 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 PDLIM3Q53GG5 364 aaPredicted RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CTSL3PQ5NE16 218 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CST9LP1Q5W188 147 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 RTL6Q6ICC9 239 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SLC7A13Q8TCU3 470 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 SGK3Q96BR1 496 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 CMSS1Q9BQ75 279 aaKnown RBP10.97□□□□□ -0.65
SHPRH-211ENST00000629427 RPS10P5Q9NQ39 176 aa10.97□□□□□ -0.65
SHPRH-211ENST00000629427 KIAA0100Q14667 2235 aaKnown RBP10.96□□□□□ -0.65
SHPRH-211ENST00000629427 A6NIN4 97 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 DPM1O60762 260 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 MTCP1P56278 107 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 RPL11P62913 178 aaKnown RBP10.96□□□□□ -0.65
SHPRH-211ENST00000629427 MEF2DQ14814 521 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 SLC10A1Q14973 349 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 C3orf58Q8NDZ4 430 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 ZFAND1Q8TCF1 268 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 NUBP2Q9Y5Y2 271 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 TSPAN11A1L157 253 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 FANCGO15287 622 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 PIP5K1CO60331 668 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 DDAH2O95865 285 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 HEXAP06865 529 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 HOXB5P09067 269 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 ERVFC1P60507 584 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 HEPHL1Q6MZM0 1159 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 OR1J2Q8NGS2 313 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 C12orf49Q9H741 205 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 SIDT1Q9NXL6 827 aaKnown RBP10.96□□□□□ -0.65
SHPRH-211ENST00000629427 TMEM265A0A087WTH1 108 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 J3KTA2 159 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 CLEC3BP05452 202 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 TACR3P29371 465 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 SLC5A2P31639 672 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 IKZF1Q13422 519 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 SLC36A2Q495M3 483 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 MIB2Q96AX9 1013 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 OR52D1Q9H346 318 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 GNB4Q9HAV0 340 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 DUSP13Q9UII6 198 aa10.96□□□□□ -0.65
SHPRH-211ENST00000629427 A6NHS1 94 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 HIDE1A8MVS5 230 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 LYRM1O43325 122 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 DOK2O60496 412 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 FCGR2AP12318 317 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 ZNF92Q03936 586 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 MGAT3Q09327 533 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 VEZF1Q14119 521 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 MPEG1Q2M385 716 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 ASB17Q8WXJ9 295 aa10.96□□□□□ -0.66
SHPRH-211ENST00000629427 THAP7Q9BT49 309 aaPredicted RBP10.96□□□□□ -0.66
SHPRH-211ENST00000629427 ANKRD10Q9NXR5 420 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms