RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 A0A1W2PRS3 328 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 KIR3DP1A8MWS1 328 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 EVPLLA8MZ36 301 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 GALR3O60755 368 aaPredicted RBP4.4□□□□□ -1.7
LINC00550-201ENST00000629293 UGT2B11O75310 529 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 E2F6O75461 281 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ABHD16AO95870 558 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ERGP11308 486 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 RNH1P13489 461 aaKnown RBP4.4□□□□□ -1.7
LINC00550-201ENST00000629293 COX7A2P14406 83 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 EEF1B2P24534 225 aaKnown RBP4.4□□□□□ -1.7
LINC00550-201ENST00000629293 PCGF2P35227 344 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 MAGEA5P43359 124 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ASMTP46597 345 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 DNASE1L1P49184 302 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 SSR4P51571 173 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 MVDP53602 400 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 MLF1P58340 268 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 CXCR4P61073 352 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 SKP1P63208 163 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 AQP6Q13520 282 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 XKR6Q5GH73 641 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 TMEM211Q6ICI0 200 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ADNP2Q6IQ32 1131 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 Q6ZPB1 254 aaPredicted RBP4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ABHD13Q7L211 337 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 CFHR4Q92496 578 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 C7orf34Q96L11 122 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ALPK1Q96QP1 1244 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 PANX1Q96RD7 426 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 SPNS1Q9H2V7 528 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 KLHL31Q9H511 634 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 DUSP21Q9H596 190 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 ATP6V1HQ9UI12 483 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 RPS6KA6Q9UK32 745 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 PSME2Q9UL46 239 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 NDRG4Q9ULP0 352 aaKnown RBP4.4□□□□□ -1.7
LINC00550-201ENST00000629293 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 CLCA3PQ9Y6N3 262 aa4.4□□□□□ -1.7
LINC00550-201ENST00000629293 A0A1W2PPL8 197 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 A0A1W2PQ72 361 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 H3BUI4 141 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 GCM2O75603 506 aaPredicted RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TOXO94900 526 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 GABARAPO95166 117 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 FABP3P05413 133 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 NPPBP16860 134 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF182P17025 639 aaPredicted RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 APEX1P27695 318 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TIA1P31483 386 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SLC35A2P78381 396 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 KCNJ10P78508 379 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CD83Q01151 205 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ACSM2AQ08AH3 577 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PDE7AQ13946 482 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 EFR3AQ14156 821 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TOMM20Q15388 145 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CTF1Q16619 201 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ZNF829Q3KNS6 432 aaPredicted RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SPIN4Q56A73 249 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PRAMEF20Q5VT98 475 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ACSM2BQ68CK6 577 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 H3F3CQ6NXT2 135 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TSEN54Q7Z6J9 526 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 VTCN1Q7Z7D3 282 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ANKRD13BQ86YJ7 626 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 LRRC56Q8IYG6 542 aaPredicted RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SETD9Q8NE22 299 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CNIH3Q8TBE1 160 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ELP5Q8TE02 316 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ZFP90Q8TF47 636 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SNX33Q8WV41 574 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 BORCS5Q969J3 196 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 NEIL2Q969S2 332 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 OR1F2PQ96R84 312 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 NODALQ96S42 347 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 MTERF1Q99551 399 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SYT3Q9BQG1 590 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CENPOQ9BU64 300 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 DUSP26Q9BV47 211 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 FUNDC2Q9BWH2 189 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SGPP1Q9BX95 441 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 GABARAPL3Q9BY60 117 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PCBD2Q9H0N5 130 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TPT1P8Q9HAU6 139 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PALMDQ9NP74 551 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TPSG1Q9NRR2 321 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 DEPPQ9NTK1 212 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 U3KQV3 271 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 CADP27708 2225 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 PINLYPA6NC86 204 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 SAGE2PA6NJ88 616 aa4.4□□□□□ -1.71
LINC00550-201ENST00000629293 FOXE1O00358 373 aaPredicted RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 ERI3O43414 337 aaKnown RBP4.4□□□□□ -1.71
LINC00550-201ENST00000629293 MRPS14O60783 128 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms