RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ATP8B1O43520 1251 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 CD1EP15812 388 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 SLC6A2P23975 617 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 CXCR1P25024 350 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 OR3A2P47893 321 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 PAMR1Q6UXH9 720 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 Q6ZT83 130 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 SSX8Q7RTT4 187 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 NUFIP2Q7Z417 695 aaKnown RBP19.86■□□□□ 0.77
SF1-220ENST00000626028 GALNT5Q7Z7M9 940 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 CLIP4Q8N3C7 705 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 MBD6Q96DN6 1003 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 ANKRD27Q96NW4 1050 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 ZNF607Q96SK3 696 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 CPPED1Q9BRF8 314 aaPredicted RBP19.86■□□□□ 0.77
SF1-220ENST00000626028 CHST2Q9Y4C5 530 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 F8P00451 2351 aa19.86■□□□□ 0.77
SF1-220ENST00000626028 RAI1Q7Z5J4 1906 aaPredicted RBP19.85■□□□□ 0.77
SF1-220ENST00000626028 IGHV3-15A0A0B4J1V0 119 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 PRORSD1PA6NEY8 169 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 GCM2O75603 506 aaPredicted RBP19.85■□□□□ 0.77
SF1-220ENST00000626028 SERPINB7O75635 380 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 DNASE1P24855 282 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 ADSLP30566 484 aaPredicted RBP19.85■□□□□ 0.77
SF1-220ENST00000626028 RBBP4Q09028 425 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 DHRS4L2Q6PKH6 230 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 DHDDSQ86SQ9 333 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 SLC30A8Q8IWU4 369 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 FOXC2Q99958 501 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 NAA11Q9BSU3 229 aaPredicted RBP19.85■□□□□ 0.77
SF1-220ENST00000626028 TMEM120AQ9BXJ8 343 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 OR11A1Q9GZK7 315 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 FGFR1OP2Q9NVK5 253 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 PRR14LQ5THK1 2151 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 DSCAMO60469 2012 aa19.85■□□□□ 0.77
SF1-220ENST00000626028 MAP1AP78559 2803 aaPredicted RBP19.84■□□□□ 0.77
SF1-220ENST00000626028 PRRC2AP48634 2157 aaKnown RBP19.84■□□□□ 0.77
SF1-220ENST00000626028 TMEM72A0PK05 275 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 ZNF716A6NP11 495 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 DEFB108AA8MXU0 73 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 NPPAP01160 153 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 RAF1P04049 648 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 GKN3PP0CG01 181 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 IST1P53990 364 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 ITGADQ13349 1161 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 COQ5Q5HYK3 327 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 SFRP5Q5T4F7 317 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 PAQR6Q6TCH4 344 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 HIPK4Q8NE63 616 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 NFKBIDQ8NI38 313 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 CGREF1Q99674 301 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 ACTR6Q9GZN1 396 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 CXXC4Q9H2H0 198 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 IKZF5Q9H5V7 419 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 PIF1Q9H611 641 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 C12orf10Q9HB07 376 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 ITGB1BP2Q9UKP3 347 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 ITPR3Q14573 2671 aa19.84■□□□□ 0.77
SF1-220ENST00000626028 HIVEP1P15822 2718 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 A8MVM7 634 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 GPIP06744 558 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 ARFIP2P53365 341 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 NR1H2P55055 460 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 OR2B6P58173 313 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 SCARB2Q14108 478 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 ADRM1Q16186 407 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 BEX5Q5H9J7 111 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 SERPINA11Q86U17 422 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 LSMEM1Q8N8F7 131 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 C11orf65Q8NCR3 313 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 NRGNQ92686 78 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 ALPK1Q96QP1 1244 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 ZNF300Q96RE9 604 aaPredicted RBP19.83■□□□□ 0.77
SF1-220ENST00000626028 ANGPT4Q9Y264 503 aa19.83■□□□□ 0.77
SF1-220ENST00000626028 ZNF814B7Z6K7 855 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 VIMP08670 466 aaKnown RBP19.82■□□□□ 0.76
SF1-220ENST00000626028 IDUAP35475 653 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 MAPRE2Q15555 327 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 C5orf46Q6UWT4 87 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 C6orf89Q6UWU4 347 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 RETREG3Q86VR2 466 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 CXorf67Q86X51 503 aaPredicted RBP19.82■□□□□ 0.76
SF1-220ENST00000626028 C10orf111Q8N326 155 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 CADM2Q8N3J6 435 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 STK35Q8TDR2 534 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 KISS1RQ969F8 398 aaPredicted RBP19.82■□□□□ 0.76
SF1-220ENST00000626028 SH3GL1Q99961 368 aa19.82■□□□□ 0.76
SF1-220ENST00000626028 BBIP1A8MTZ0 92 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 SLC22A2O15244 555 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 IMPDH2P12268 514 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 PRG2P13727 222 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 CCNA2P20248 432 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 FPR1P21462 350 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 IL32P24001 234 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 ART1P52961 327 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 NFYCQ13952 458 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 CYLC2Q14093 348 aaPredicted RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 NET1Q7Z628 596 aaPredicted RBP19.81■□□□□ 0.76
SF1-220ENST00000626028 P2RY8Q86VZ1 359 aa19.81■□□□□ 0.76
SF1-220ENST00000626028 ZNF100Q8IYN0 542 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms