RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZNF74Q16587 644 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 THSD4Q6ZMP0 1018 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 GRINAQ7Z429 371 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 PHC2Q8IXK0 858 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 DND1Q8IYX4 353 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 SLC37A3Q8NCC5 494 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 B4GALNT2Q8NHY0 566 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 MCFD2Q8NI22 146 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ST8SIA1Q92185 356 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ERMAPQ96PL5 475 aaPredicted RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 LMF1Q96S06 567 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 CHCHD6Q9BRQ6 235 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 SLIRPQ9GZT3 109 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 NRIP3Q9NQ35 241 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ERVK13-1Q9NX77 482 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 TAS2R16Q9NYV7 291 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 CLEC2DQ9UHP7 191 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ADAMTS9Q9P2N4 1935 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 LOC100506127A0A0U1RQW1 187 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 OR2T1O43869 369 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 LIMS3P0CW19 117 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 LIMS4P0CW20 117 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 GABRA5P31644 462 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 RNF144AP50876 292 aaPredicted RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 NUBP1P53384 320 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 MFSD13AQ14CX5 517 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ANGPT1Q15389 498 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 GPR139Q6DWJ6 353 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 APOOLQ6UXV4 268 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 HAVCR2Q8TDQ0 301 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 STK35Q8TDR2 534 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 SECISBP2Q96T21 854 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 TEAD3Q99594 435 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 NXF2Q9GZY0 626 aaKnown RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 MMP25Q9NPA2 562 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 OCIAD1Q9NX40 245 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 CRNNQ9UBG3 495 aaPredicted RBP14.93□□□□□ -0.02
LDB3-208ENST00000623007 NOX1Q9Y5S8 564 aa14.93□□□□□ -0.02
LDB3-208ENST00000623007 ASXL3Q9C0F0 2248 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 TECTAO75443 2155 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 TRAV36DV7A0A075B6V5 113 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 PNMA8CA0A1B0GUJ8 204 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 J3QRE1 110 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 PPP1R3DO95685 299 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 ITPKBP27987 946 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 TACR3P29371 465 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 ENTPD1P49961 510 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 BMXP51813 675 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 DLX5P56178 289 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 GGTLC2Q14390 218 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 SSX1Q16384 188 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 NDUFAF6Q330K2 333 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 FAAH2Q6GMR7 532 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 CBLN3Q6UW01 205 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 PRR22Q8IZ63 422 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 GATSQ8NAP1 163 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 OR6Q1Q8NGQ2 317 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 RHBDD1Q8TEB9 315 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 RPL3LQ92901 407 aaKnown RBP14.92□□□□□ -0.02
LDB3-208ENST00000623007 OTULINQ96BN8 352 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 SH3YL1Q96HL8 342 aaPredicted RBP14.92□□□□□ -0.02
LDB3-208ENST00000623007 FAM117AQ9C073 453 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 OR51E2Q9H255 320 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 ZBTB20Q9HC78 741 aaPredicted RBP14.92□□□□□ -0.02
LDB3-208ENST00000623007 IL20RAQ9UHF4 553 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 PEX16Q9Y5Y5 336 aa14.92□□□□□ -0.02
LDB3-208ENST00000623007 SPIN1Q9Y657 262 aaPredicted RBP14.92□□□□□ -0.02
LDB3-208ENST00000623007 ZNF670-ZNF695F2Z2N8 137 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 NUDT14O95848 222 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 HLA-DPB1P04440 258 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 CD14P08571 375 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 ASAH2BP0C7U1 165 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 ZNF12P17014 697 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 FGF9P31371 208 aaPredicted RBP14.91□□□□□ -0.02
LDB3-208ENST00000623007 CENPAP49450 140 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 MLLT10P55197 1068 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 RPS7P62081 194 aaKnown RBP14.91□□□□□ -0.02
LDB3-208ENST00000623007 HSF2Q03933 536 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 FHL1Q13642 323 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 PON3Q15166 354 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 FAM98AQ8NCA5 519 aaKnown RBP14.91□□□□□ -0.02
LDB3-208ENST00000623007 ASPNQ9BXN1 380 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 NRSN2Q9GZP1 204 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 TRIM36Q9NQ86 728 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 ASB6Q9NWX5 421 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 MOKQ9UQ07 419 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 FER1L5A0AVI2 2057 aa14.91□□□□□ -0.02
LDB3-208ENST00000623007 IGKV1D-42A0A075B6H8 117 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 TRBV11-1A0A0K0K1C0 115 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 DAPL1A0PJW8 107 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 CDC14CA4D256 554 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 ANKUB1A6NFN9 424 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 A8MVM7 634 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 TAF4O00268 1085 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SLC2A10O95528 541 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 TXNDC12O95881 172 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 IL1AP01583 271 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 SLC2A5P22732 501 aa14.9□□□□□ -0.02
LDB3-208ENST00000623007 FKBP2P26885 142 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms