RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CLCC1Q96S66 551 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 RNF2Q99496 336 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 GAL3ST1Q99999 423 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 NMUR2Q9GZQ4 415 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 SLITRK2Q9H156 845 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 EHD1Q9H4M9 534 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 REEP4Q9H6H4 257 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 METTL7AQ9H8H3 244 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ISG20L2Q9H9L3 353 aaKnown RBP3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF639Q9UID6 485 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 NPTNQ9Y639 398 aa3.6□□□□□ -1.83
CPNE3-213ENST00000622183 ARHGEF35A5YM69 484 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 K7N7A8 449 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 SLC2A3P11169 496 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 AQP1P29972 269 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 HTR1FP30939 366 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 CALCRP30988 508 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 OR3A4PP47883 348 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 PKNOX1P55347 436 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 BIDP55957 195 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 ASPHQ12797 758 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 VGLL4Q14135 290 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF239Q16600 458 aaKnown RBP3.59□□□□□ -1.83
CPNE3-213ENST00000622183 IMMTQ16891 758 aaKnown RBP3.59□□□□□ -1.83
CPNE3-213ENST00000622183 C6orf226Q5I0X4 101 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 KLF17Q5JT82 389 aaPredicted RBP3.59□□□□□ -1.83
CPNE3-213ENST00000622183 GPRC6AQ5T6X5 926 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 GDPD3Q7L5L3 318 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC65Q8IXS2 484 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 UBE2J2Q8N2K1 259 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 NECAB1Q8N987 351 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 OR9A1PQ8NGU1 263 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 ST8SIA1Q92185 356 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 NEIL2Q969S2 332 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 SERAC1Q96JX3 654 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 CNPY3Q9BT09 278 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 PKIBQ9C010 78 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 TNFRSF19Q9NS68 423 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 TMEM9Q9P0T7 183 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 SUN2Q9UH99 717 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 CLEC4EQ9ULY5 219 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 VSIG4Q9Y279 399 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 IFT52Q9Y366 437 aa3.59□□□□□ -1.83
CPNE3-213ENST00000622183 ATP10AO60312 1499 aa3.59□□□□□ -1.84
CPNE3-213ENST00000622183 GOLGA8SH3BPF8 625 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 DCTN6O00399 190 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 HCRTR1O43613 425 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 PSMB1P20618 241 aaKnown RBP3.58□□□□□ -1.84
CPNE3-213ENST00000622183 BTDP43251 543 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 IGLV3-21P80748 117 aaPredicted RBP3.58□□□□□ -1.84
CPNE3-213ENST00000622183 CDK16Q00536 496 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 BST1Q10588 318 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 NSUN5P1Q3KNT7 163 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 CARD16Q5EG05 197 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 UNQ9370/PRO34162Q6UXP9 181 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 UTS2BQ765I0 119 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 NANOGNBQ7Z5D8 188 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 HSD17B13Q7Z5P4 300 aaPredicted RBP3.58□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF589Q86UQ0 364 aaPredicted RBP3.58□□□□□ -1.84
CPNE3-213ENST00000622183 SLC22A9Q8IVM8 553 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 ALLCQ8N6M5 410 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 OR10H4Q8NGA5 316 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 AKR7LQ8NHP1 331 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 PGLYRP4Q96LB8 373 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 TCEANC2Q96MN5 208 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 SMIM14Q96QK8 99 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 TRIM62Q9BVG3 475 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 RBKSQ9H477 322 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 NMRK1Q9NWW6 199 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 BFARQ9NZS9 450 aa3.58□□□□□ -1.84
CPNE3-213ENST00000622183 RPL36Q9Y3U8 105 aaKnown RBP3.58□□□□□ -1.84
CPNE3-213ENST00000622183 A0A0G2JRQ6 117 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 IQANK1A0A1B0GTG1 560 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 A0A1W2PPE3 182 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 TCRBV9S1A1TA0A576 114 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 BTBD17A6NE02 478 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 EPOPA6NHQ4 379 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 A8MXQ7 604 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 TNFSF11O14788 317 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 NDUFB10O96000 172 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 COL2A1P02458 1487 aaPredicted RBP3.57□□□□□ -1.84
CPNE3-213ENST00000622183 HSPB1P04792 205 aaKnown RBP3.57□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF853P0CG23 659 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 ETS2P15036 469 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 NPR2P20594 1047 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 RFC4P35249 363 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 DDOSTP39656 456 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OPRD1P41143 372 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 DIO3P55073 304 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 SSX2Q16385 188 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 ISXQ2M1V0 245 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 KRTAP27-1Q3LI81 207 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 PRAMEF5Q5TYX0 476 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OR2G6Q5TZ20 316 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 PRAMEF6Q5VXH4 476 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OR52E8Q6IFG1 317 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 UQCC3Q6UW78 93 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 ENPP6Q6UWR7 440 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms