RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TMBIM6P55061 237 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 SUMO3P55854 103 aaPredicted RBP19.52■□□□□ 0.72
SPAST-204ENST00000621856 DNASE1L3Q13609 305 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 FHL1Q13642 323 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 KLHL22Q53GT1 634 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 FCRLBQ6BAA4 426 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 CPOQ8IVL8 374 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 RNF138Q8WVD3 245 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 FUNDC2Q9BWH2 189 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 HINT3Q9NQE9 182 aaKnown RBP19.52■□□□□ 0.72
SPAST-204ENST00000621856 SDHAF3Q9NRP4 125 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 PPP4R1LQ9P1A2 415 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 PCNX3Q9H6A9 2034 aa19.52■□□□□ 0.72
SPAST-204ENST00000621856 TMED7-TICAM2A0A0A6YYA0 188 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 RIIAD1A6NNX1 92 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 H3BMQ9 156 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 PTHP01270 115 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 ADRA2AP08913 450 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 NOS3P29474 1203 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 GAS1P54826 345 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 EGR4Q05215 589 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 ZNF74Q16587 644 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 AADACL4Q5VUY2 407 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 OPN5Q6U736 354 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 GRINAQ7Z429 371 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 NLGN4YQ8NFZ3 816 aaPredicted RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 OR52I1Q8NGK6 324 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 TMEM234Q8WY98 164 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 COG8Q96MW5 612 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 LRFN3Q9BTN0 628 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 FN3KQ9H479 309 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 CDCP1Q9H5V8 836 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 CMC2Q9NRP2 79 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 MED11Q9P086 117 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 YARS2Q9Y2Z4 477 aaKnown RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 TMED7Q9Y3B3 224 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 FAM183AA6NL82 134 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 VGLL3A8MV65 326 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 TP53I11O14683 189 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 FOXD2O60548 495 aaPredicted RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 RAB36O95755 333 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 HK1P19367 917 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 RPL4P36578 427 aaKnown RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 DLSTP36957 453 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 MTNR1AP48039 350 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 ZNF791Q3KP31 576 aaPredicted RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 GXYLT1Q4G148 440 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 NXNL2Q5VZ03 156 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 PLBD1Q6P4A8 553 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 ARHGAP11AQ6P4F7 1023 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 IGFN1Q86VF2 1251 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 RAB2BQ8WUD1 216 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 ASB15Q8WXK1 588 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 KTI12Q96EK9 354 aaPredicted RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 ERMAPQ96PL5 475 aaPredicted RBP19.51■□□□□ 0.71
SPAST-204ENST00000621856 DOK1Q99704 481 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 TAPBPLQ9BX59 468 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 NANSQ9NR45 359 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 FBXL4Q9UKA2 621 aa19.51■□□□□ 0.71
SPAST-204ENST00000621856 SPAARA0A1B0GVQ0 90 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 DKK1O94907 266 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 HPP00738 406 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 IFNGP01579 166 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 FTH1P19P0C7X4 201 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 ACVR2AP27037 513 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 TIGD6Q17RP2 521 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 IL20RBQ6UXL0 311 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 ZNF367Q7RTV3 350 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 GID4Q8IVV7 300 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 BBS1Q8NFJ9 593 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 NACC2Q96BF6 587 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 LGALS12Q96DT0 336 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 MOGAT1Q96PD6 335 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 PCDHGB6Q9Y5F9 930 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 WIF1Q9Y5W5 379 aa19.5■□□□□ 0.71
SPAST-204ENST00000621856 PRR23D1E9PI22 279 aaPredicted RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 MASP2O00187 686 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 SUSD5O60279 629 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 RAD1O60671 282 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 PRR23D2P0DMB1 279 aaPredicted RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 PEPDP12955 493 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 ICAM2P13598 275 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 ZNF3P17036 446 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 PTGDSP41222 190 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 HTR3AP46098 478 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 RPS5P46782 204 aaKnown RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 SSR4P51571 173 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 RAB40BQ12829 278 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 RPS19BP1Q86WX3 136 aaKnown RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 ST8SIA1Q92185 356 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 YIPF6Q96EC8 236 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 MED20Q9H944 212 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 MRPS18AQ9NVS2 196 aaKnown RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 ENPP5Q9UJA9 477 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 DIMT1Q9UNQ2 313 aaKnown RBP19.49■□□□□ 0.71
SPAST-204ENST00000621856 ERGIC3Q9Y282 383 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 IER3IP1Q9Y5U9 82 aa19.49■□□□□ 0.71
SPAST-204ENST00000621856 TRAV36DV7A0A075B6V5 113 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 C21orf140B9A014 251 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 MCIDASD6RGH6 385 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms