RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CDH12P55289 794 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CARD18P57730 90 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 RAC3P60763 192 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 BNIP1Q12981 228 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SGCBQ16585 318 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ALG10BQ5I7T1 473 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 XKRXQ6PP77 449 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 WDR88Q6ZMY6 472 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CHMP1BQ7LBR1 199 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 RANBP3LQ86VV4 465 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 RELL2Q8NC24 303 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ADAMTS16Q8TE57 1224 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 RNF128Q8TEB7 428 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 PROX1Q92786 737 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SLC38A4Q969I6 547 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CPNE4Q96A23 557 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 INTS12Q96CB8 462 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 TPD52L3Q96J77 140 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 TM9SF2Q99805 663 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 TRIM2Q9C040 744 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 GORASP2Q9H8Y8 452 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 C12orf10Q9HB07 376 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SNX13Q9Y5W8 968 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SPIN1Q9Y657 262 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 IGHV3-15A0A0B4J1V0 119 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CPSF4LA6NMK7 179 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ARPC2O15144 300 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 GSTA4O15217 222 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 FUT4P22083 530 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CXCR1P25024 350 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 FKBP2P26885 142 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CHRNB4P30926 498 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 AGFG1P52594 562 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SMSP52788 366 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 NCALDP61601 193 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ULK3Q6PHR2 472 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 TSEN54Q7Z6J9 526 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ROBO4Q8WZ75 1007 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 DCAF13Q9NV06 445 aaKnown RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 ING1Q9UK53 422 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-217ENST00000621474 SLC9A8Q9Y2E8 581 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 HDGFL3Q9Y3E1 203 aa12.8□□□□□ -0.36
CBWD3-217ENST00000621474 A0A087WUJ7 227 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 HSPB2A8KAH6 182 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 PMS2P2O95744 297 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 TMIGD3P0DMS9 266 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-217ENST00000621474 TFPIP10646 304 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 H3F3AP84243 136 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 TFF3Q07654 80 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 HSPB2Q16082 182 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 SPATS1Q496A3 300 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF613Q6PF04 617 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 LINC00114Q6XXX2 140 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 LILRB4Q8NHJ6 448 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 ABHD3Q8WU67 409 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 DNAJA4Q8WW22 397 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-217ENST00000621474 FAM162AQ96A26 154 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 CLPTM1LQ96KA5 538 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 ZFP3Q96NJ6 502 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 AMBRA1Q9C0C7 1298 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 TMEM27Q9HBJ8 222 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF629Q9UEG4 869 aaPredicted RBP12.79□□□□□ -0.36
CBWD3-217ENST00000621474 MCTS1Q9ULC4 181 aaKnown RBP12.79□□□□□ -0.36
CBWD3-217ENST00000621474 HECTD1Q9ULT8 2610 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 A1L4Q6 167 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 A8MVM7 634 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 SULT2B1O00204 365 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 CHP2O43745 196 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 RAMP1O60894 148 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 PDE5AO76074 875 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 CLDN14O95500 239 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF682O95780 498 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 PTNP21246 168 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 BMP5P22003 454 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 CTSSP25774 331 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-217ENST00000621474 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
CBWD3-217ENST00000621474 VWA1Q6PCB0 445 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 ARHGAP24Q8N264 748 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 CA5BP1Q8WTZ4 195 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 KTI12Q96EK9 354 aaPredicted RBP12.78□□□□□ -0.36
CBWD3-217ENST00000621474 PRSS27Q9BQR3 290 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 ZNF426Q9BUY5 554 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 ADPRHL2Q9NX46 363 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 RPS6KB2Q9UBS0 482 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 MAGEL2Q9UJ55 1249 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 PRPF19Q9UMS4 504 aaKnown RBP12.78□□□□□ -0.36
CBWD3-217ENST00000621474 TRAPPC4Q9Y296 219 aa12.78□□□□□ -0.36
CBWD3-217ENST00000621474 A0A1W2PNV4 684 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms