RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 MFSD2BA6NFX1 497 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 FOLR1P15328 257 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 GRK6P43250 576 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RASGEF1BQ0VAM2 473 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 GBX1Q14549 363 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TGIF1Q15583 401 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CHST9Q7L1S5 443 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 LRP10Q7Z4F1 713 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 LRRTM4Q86VH4 590 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ST6GALNAC3Q8NDV1 305 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR4K17Q8NGC6 315 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR11H7Q8NGC8 314 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DPH7Q9BTV6 452 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 MROH1Q8NDA8 1641 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CRYBB2P43320 205 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TSFMP43897 325 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RIN1Q13671 783 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TOMM20LQ6UXN7 152 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 LRRC28Q86X40 367 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 C16orf58Q96GQ5 468 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 BTN2A3PQ96KV6 586 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 HRASLSQ9HDD0 168 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ACADMP11310 421 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ITGB8P26012 769 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PCGF2P35227 344 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CLDN20P56880 219 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TGFBR3Q03167 851 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TARBP2Q15633 366 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ELAVL1Q15717 326 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ADGRF1Q5T601 910 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DMRTA1Q5VZB9 504 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 BVESQ8NE79 360 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 C5orf34Q96MH7 638 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 NMNAT2Q9BZQ4 307 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC6A16Q9GZN6 736 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 IKZF5Q9H5V7 419 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RHOFQ9HBH0 211 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 POMT2Q9UKY4 750 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR2T1O43869 369 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CD52P31358 61 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 FBXL22Q6P050 247 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DLK2Q6UY11 383 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DPY19L4Q7Z388 723 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 BATF2Q8N1L9 274 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF619Q8N2I2 560 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 HSD17B11Q8NBQ5 300 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR56A3Q8NH54 315 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 MS4A4AQ96JQ5 239 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC14A2Q15849 920 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RNASE10Q5GAN6 216 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 COL13A1Q5TAT6 717 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 AWAT2Q6E213 333 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PSAPL1Q6NUJ1 521 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CYB5D2Q8WUJ1 264 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 GRHPRQ9UBQ7 328 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 FBXO4Q9UKT5 387 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PCDHB1Q9Y5F3 818 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF354AO60765 605 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CCR8P51685 355 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ACTBP60709 375 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CXCR4P61073 352 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ACTG1P63261 375 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PLK5Q496M5 336 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 VRK2Q86Y07 508 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PIANPQ8IYJ0 282 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 OR5K2Q8NHB8 316 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 FAM163AQ96GL9 167 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 AMDHD1Q96NU7 426 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CAMK1GQ96NX5 476 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PIGMQ9H3S5 423 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CLEC4EQ9ULY5 219 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 A0A1W2PS29 197 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GLP1RP43220 463 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF750Q32MQ0 723 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 MEPCEQ7L2J0 689 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GID4Q8IVV7 300 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SKA3Q8IX90 412 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 OR1S2Q8NGQ3 325 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 POTEKPQ9BYX7 375 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CLDN4O14493 209 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CLN5O75503 358 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 C8GP07360 202 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CSF1P09603 554 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GIPP09681 153 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TCTAP57738 103 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 LEG1Q6P5S2 330 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF439Q8NDP4 499 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SUV39H2Q9H5I1 410 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 DHDHQ9UQ10 334 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ABCA9Q8IUA7 1624 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 HSBP1L1C9JCN9 74 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 H7C1C5 153 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NSA2O95478 260 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SEMG1P04279 462 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SLC6A6P31641 620 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms