RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	RAC3	P60763	192 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	COPZ1	P61923	177 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	SIRPA	P78324	504 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	EGR4	Q05215	589 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	OR1Q1	Q15612	314 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	CYBRD1	Q53TN4	286 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	C6orf89	Q6UWU4	347 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	WDR88	Q6ZMY6	472 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	RINL	Q6ZS11	566 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	TMPPE	Q6ZT21	453 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	BTLA	Q7Z6A9	289 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	DEFB107A	Q8IZN7	70 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	RBM15B	Q8NDT2	890 aa	Known RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	OR52E4	Q8NGH9	312 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	SLC26A7	Q8TE54	656 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	CPNE4	Q96A23	557 aa	Predicted RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	NSL1	Q96IY1	281 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	ZFP3	Q96NJ6	502 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	MCHR1	Q99705	422 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	KCTD14	Q9BQ13	255 aa	Predicted RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	PAQR5	Q9NXK6	330 aa	Predicted RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	ADA2	Q9NZK5	511 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	JKAMP	Q9P055	326 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	ZNF629	Q9UEG4	869 aa	Predicted RBP	9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	CD300A	Q9UGN4	299 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	EGFL7	Q9UHF1	273 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	AP3M1	Q9Y2T2	418 aa		9.64	□□□□□ -0.87
TARDBP-223	ENST00000620632	CPSF4L	A6NMK7	179 aa	Known RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632		B2RBV5	119 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SULT2B1	O00204	365 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	UBOX5	O94941	541 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SYNGR4	O95473	234 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PMS2P2	O95744	297 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	IL18BP	O95998	194 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	CGA	P01215	116 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	TCN1	P20061	433 aa	Predicted RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	CXCR1	P25024	350 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SNTB1	Q13884	538 aa	Known RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	CEACAM7	Q14002	265 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	FXN	Q16595	210 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SLC25A35	Q3KQZ1	300 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	ALG10B	Q5I7T1	473 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	ENTPD8	Q5MY95	495 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PDSS1	Q5T2R2	415 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	FCRLA	Q7L513	359 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	TRPM8	Q7Z2W7	1104 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	VTCN1	Q7Z7D3	282 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	CARM1	Q86X55	608 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	P3H2	Q8IVL5	708 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	ACBD4	Q8NC06	268 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	STARD4	Q96DR4	205 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	KTI12	Q96EK9	354 aa	Predicted RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	CDRT15	Q96T59	188 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PSD2	Q9BQI7	771 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	ZNF559	Q9BR84	538 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PTDSS2	Q9BVG9	487 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SFXN3	Q9BWM7	321 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PRRG4	Q9BZD6	226 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	PCDHAC1	Q9H158	963 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	KLHL28	Q9NXS3	571 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SLC13A4	Q9UKG4	626 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	MCTS1	Q9ULC4	181 aa	Known RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SH3GLB1	Q9Y371	365 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	HDGFL3	Q9Y3E1	203 aa		9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	SPIN1	Q9Y657	262 aa	Predicted RBP	9.63	□□□□□ -0.87
TARDBP-223	ENST00000620632	DCHS2	Q6V1P9	2916 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CELSR2	Q9HCU4	2923 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	LIPT2	A6NK58	231 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CYSRT1	A8MQ03	144 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632		A8MVM7	634 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	EEF1E1-BLOC1S5	C9J1V9	151 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	DVL2	O14641	736 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	EEF1E1	O43324	174 aa	Known RBP	9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CYTIP	O60759	359 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	FMO6P	O60774	539 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	SS18L1	O75177	396 aa	Predicted RBP	9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	SERPINA1	P01009	418 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	FCGR2A	P12318	317 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	HSD17B1	P14061	328 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	IGFBP2	P18065	325 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	FPR1	P21462	350 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CALB2	P22676	271 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	EDNRA	P25101	427 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	AGTR1	P30556	359 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	OPRM1	P35372	400 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	P2RY4	P51582	365 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CDH12	P55289	794 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	NCALD	P61601	193 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	SELENOW	P63302	87 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	H3F3A	P84243	136 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	SP5	Q6BEB4	398 aa	Predicted RBP	9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	ZNF787	Q6DD87	383 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	ABLIM2	Q6H8Q1	611 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	OR2A2	Q6IF42	318 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	LINC00114	Q6XXX2	140 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	CBLL1	Q75N03	491 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	FAM214B	Q7L5A3	538 aa		9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	TSEN54	Q7Z6J9	526 aa	Known RBP	9.62	□□□□□ -0.87
TARDBP-223	ENST00000620632	LUZP2	Q86TE4	346 aa		9.62	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms