RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 SEC22AQ96IW7 307 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 MBD2Q9UBB5 411 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 KLF2Q9Y5W3 355 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 KPNA3O00505 521 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SOCS5O75159 536 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 FOSL1P15407 271 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 OMPP47874 163 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SOX2P48431 317 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 ARFIP1P53367 373 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 TGM3Q08188 693 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 ACSM1Q08AH1 577 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 H3F3CQ6NXT2 135 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 NIPAL3Q6P499 406 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 ZNF620Q6ZNG0 422 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 MUC20Q8N307 709 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 OR14A16Q8NHC5 309 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 DOK4Q8TEW6 326 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 ZMYND19Q96E35 227 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 CAMK1GQ96NX5 476 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 FKRPQ9H9S5 495 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SLC7A7Q9UM01 511 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 SLCO2B1O94956 709 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 CNR1P21554 472 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 PDZK1IP1Q13113 114 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 UBE2NLQ5JXB2 153 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 Q6ZVU0 165 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 BEST3Q8N1M1 668 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 RASGEF1AQ8N9B8 481 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 DNAAF1Q8NEP3 725 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 OR1S2Q8NGQ3 325 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 DVL3Q92997 716 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-225ENST00000619541 COL26A1Q96A83 441 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 BCL2L14Q9BZR8 327 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 FBXL3Q9UKT7 428 aa13.47□□□□□ -0.25
SYNRG-225ENST00000619541 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 GRPRP30550 384 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 MAPK8P45983 427 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 EPHB3P54753 998 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 AVPI1Q5T686 147 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 UNQ6126/PRO20091Q6UXV3 157 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 NDUFAF7Q7L592 441 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 CMIPQ8IY22 773 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 ZSCAN1Q8NBB4 408 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 PPP1R16AQ96I34 528 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 MS4A4EQ96PG1 132 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 PBX4Q9BYU1 374 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 NOX4Q9NPH5 578 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 MRPL17Q9NRX2 175 aaKnown RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 MOKQ9UQ07 419 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 F5H0A9 414 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 GABARAPH6UMI1 98 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 FOXE1O00358 373 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 GREM1O60565 184 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 CXCL14O95715 111 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 KHKP50053 298 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 CBFBQ13951 182 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 GAREM2Q75VX8 874 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 SSX6Q7RTT6 188 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 PAQR8Q8TEZ7 354 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 ACOT11Q8WXI4 607 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 TRMT2BQ96GJ1 504 aaKnown RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 SLC41A3Q96GZ6 507 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 TEAD3Q99594 435 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 SLC25A32Q9H2D1 315 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 FN3KQ9H479 309 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 PRMT8Q9NR22 394 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 ZNF230Q9UIE0 474 aaPredicted RBP13.46□□□□□ -0.25
SYNRG-225ENST00000619541 PCDHB10Q9UN67 800 aa13.46□□□□□ -0.25
SYNRG-225ENST00000619541 NAP1L6A6NFF2 107 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 PLPP2O43688 288 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 TYRP14679 529 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 TEAD1P28347 426 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 SSR2P43308 183 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 LMAN2Q12907 356 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 AMER3Q8N944 861 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 SUN3Q8TAQ9 357 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 GPR174Q9BXC1 333 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 TAC3Q9UHF0 121 aa13.46□□□□□ -0.26
SYNRG-225ENST00000619541 DOCK6Q96HP0 2047 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 OR2AT4A6NND4 320 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 CSN2P05814 226 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 NFYBP25208 207 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 GABRR2P28476 465 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 RORAP35398 523 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 RBM39Q14498 530 aaKnown RBP13.45□□□□□ -0.26
SYNRG-225ENST00000619541 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 TCEAL8Q8IYN2 117 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 ZNF614Q8N883 585 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 GLIPR2Q9H4G4 154 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 IL20Q9NYY1 176 aa13.45□□□□□ -0.26
SYNRG-225ENST00000619541 COMMD9Q9P000 198 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms