RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PGGHGQ32M88 737 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ZNF660Q6AZW8 331 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 CDH26Q8IXH8 852 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 C12orf45Q8N5I9 185 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 MS4A8Q9BY19 250 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 BIN3Q9NQY0 253 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 DUX4Q9UBX2 424 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 SLC7A7Q9UM01 511 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 CDHR4A6H8M9 788 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 TBC1D3BA6NDS4 549 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 KDM4EB2RXH2 506 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PRAMEF2O60811 474 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 OLFM2O95897 454 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 LIPCP11150 499 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 HTR1FP30939 366 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 TRAM2Q15035 370 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 TAF13Q15543 124 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 TMEM69Q5SWH9 247 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 RAB12Q6IQ22 244 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ZNF793Q6ZN11 406 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 NDUFAF7Q7L592 441 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ADAMTS15Q8TE58 950 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PRRC1Q96M27 445 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ENKD1Q9H0I2 346 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 A4GALTQ9NPC4 353 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PPIL1Q9Y3C6 166 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 IGLON5A6NGN9 336 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 CDC123O75794 336 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 RHOP08100 348 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 EPXP11678 715 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 GRPRP30550 384 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 BMP8BP34820 402 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PTH2RP49190 550 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 H2BFSP57053 126 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 SLC9A5Q14940 896 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ODF4Q2M2E3 257 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 YOD1Q5VVQ6 348 aaPredicted RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 BMP8AQ7Z5Y6 402 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 OR5M9Q8NGP3 310 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 CXorf40AQ8TE69 158 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 SMPDL3BQ92485 455 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 ARRDC3Q96B67 414 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 SEC22AQ96IW7 307 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 RNF208Q9H0X6 261 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 FKRPQ9H9S5 495 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 USP36Q9P275 1121 aaKnown RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 PURGQ9UJV8 347 aaKnown RBP12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 FBXL3Q9UKT7 428 aa12.4□□□□□ -0.42
PCDHA11-202ENST00000616325 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 EPPINO95925 133 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 FABP1P07148 127 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SPP1P10451 314 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 IFNGR1P15260 489 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CSF2RAP15509 400 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 ART1P52961 327 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 PRMT2P55345 433 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 PRR5P85299 388 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 OR4C11Q6IEV9 310 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 DPPA4Q7L190 304 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF546Q86UE3 836 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SHISA5Q8N114 240 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SLC44A3Q8N4M1 653 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 DUSP19Q8WTR2 217 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TREM1Q9NP99 234 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 C14orf105Q9NVL8 296 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CAMK2AQ9UQM7 478 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 PRRT4C9JH25 899 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 F5H5P2 479 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CDC42EP2O14613 210 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 HIST1H2ABP04908 130 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 CSN2P05814 226 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 S100A6P06703 90 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 NDUFV2P19404 249 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 SOX2P48431 317 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 KHKP50053 298 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 C21orf58P58505 322 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 AGERQ15109 404 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 OR7E24Q6IFN5 339 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 GLDNQ6ZMI3 551 aaPredicted RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 HIST3H2AQ7L7L0 130 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 HSD17B13Q7Z5P4 300 aaPredicted RBP12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 TMEM17Q86X19 198 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 DCUN1D3Q8IWE4 304 aa12.39□□□□□ -0.43
PCDHA11-202ENST00000616325 C12orf76Q8N812 135 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms