RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 PLCL2Q9UPR0 1127 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 PCYT1BQ9Y5K3 369 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 A0A1W2PPV9 198 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 C17orf105B2RV13 164 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 FAM47E-STBD1D6RA91 191 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 I3L521 148 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ARPC3O15145 178 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 LALBAP00709 142 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 PLGP00747 810 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ARSBP15848 533 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 STOMP27105 288 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAZP56270 477 aaKnown RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 HSD17B7P56937 341 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 P2RY14Q15391 338 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ALG10Q5BKT4 473 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM69Q5SWH9 247 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 CD300LDQ6UXZ3 194 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 RPTNQ6XPR3 784 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR6C4Q8NGE1 309 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 AKAP1Q92667 903 aaKnown RBP eCLIP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 S100A13Q99584 98 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 WFDC6Q9BQY6 131 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 POTEKPQ9BYX7 375 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 GPN1Q9HCN4 374 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 RANGRFQ9HD47 186 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 FGF21Q9NSA1 209 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAU2Q9Y6X3 613 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 EFCAB7A8K855 629 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 B4DXG7 233 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 UBL3O95164 117 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR2T7P0C7T2 308 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 S1PR1P21453 382 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 CD38P28907 300 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 PBX2P40425 430 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 RPS27P42677 84 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 MAT1AQ00266 395 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ASAH1Q13510 395 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 LIPNQ5VXI9 398 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 THSD4Q6ZMP0 1018 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 PRSS41Q7RTY9 318 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF440Q8IYI8 595 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 RCBTB1Q8NDN9 531 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR2T27Q8NH04 317 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 MRPL38Q96DV4 380 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 INPP5EQ9NRR6 644 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 FBXO34Q9NWN3 711 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 EIF3KQ9UBQ5 218 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 EGFP01133 1207 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GIMD1P0DJR0 217 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GIFP27352 417 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 PRPS1P60891 318 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 DUSP8Q13202 625 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TAF13Q15543 124 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SFXN4Q6P4A7 337 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF613Q6PF04 617 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR5M3Q8NGP4 307 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 BAHD1Q8TBE0 780 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF431Q8TF32 576 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 THRSPQ92748 146 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC6A18Q96N87 628 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SEC61A2Q9H9S3 476 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 RXFP3Q9NSD7 469 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 COMMD9Q9P000 198 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 LRIT1Q9P2V4 623 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 EPHA6Q9UF33 1036 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 FBXL4Q9UKA2 621 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 MRPS2Q9Y399 296 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRIM3O75382 744 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GATBO75879 557 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 PGCP20142 388 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 DNASE1L1P49184 302 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TSPAN5P62079 268 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 IRF3Q14653 427 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 RAB35Q15286 201 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 HES5Q5TA89 166 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC22A10Q63ZE4 541 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 LEG1Q6P5S2 330 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 VASH1Q7L8A9 365 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMED4Q7Z7H5 227 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF595Q8IYB9 648 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SIMC1Q8NDZ2 872 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR4Q3Q8NH05 313 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SP7Q8TDD2 431 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GPR148Q8TDV2 347 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZDHHC1Q8WTX9 485 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 NKD1Q969G9 470 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 NARS2Q96I59 477 aaKnown RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR14A2Q96R54 314 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 GINS4Q9BRT9 223 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ALG12Q9BV10 488 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 C20orf141Q9NUB4 165 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 USF3Q68DE3 2245 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 SERINC4A6NH21 518 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 CENPBD1B2RD01 187 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 RGS9O75916 674 aaPredicted RBP5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 CSF3P09919 207 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 VAMP1P23763 118 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 ADH7P40394 386 aa5.21□□□□□ -1.58
SYNCRIP-204ENST00000616122 NRG3P56975 720 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms