RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TMEM185BQ9H7F4 350 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ICKQ9UPZ9 632 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 WDR45Q9Y484 360 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 WASH3PC4AMC7 463 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ECDO95905 644 aaPredicted RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 F12P00748 615 aaPredicted RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 MAS1P04201 325 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 S100A9P06702 114 aaKnown RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 TDGQ13569 410 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SERTAD2Q14140 314 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 METTL11BQ5VVY1 283 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 DCAF12L2Q5VW00 463 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PM20D2Q8IYS1 436 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SYNPRQ8TBG9 265 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ZCCHC10Q8TBK6 192 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 FCAMRQ8WWV6 532 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 VOPP1Q96AW1 172 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SHARPINQ9H0F6 387 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 SIDT1Q9NXL6 827 aaKnown RBP12.18□□□□□ -0.46
MSH6-214ENST00000616033 IL20Q9NYY1 176 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 DOCK9Q9BZ29 2069 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 PLXNB3Q9ULL4 1909 aa12.18□□□□□ -0.46
MSH6-214ENST00000616033 UBE2QL1A1L167 161 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 KRT33AO76009 404 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SELPP16109 830 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 MAT2AP31153 395 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 RPS27P42677 84 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 TNFRSF17Q02223 184 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 KLF9Q13886 244 aaPredicted RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 NDUFAF6Q330K2 333 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 PARS2Q7L3T8 475 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 ZNF547Q8IVP9 402 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 OR10K1Q8NGX5 313 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 C2orf15Q8WU43 125 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 PINK1Q9BXM7 581 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 MFFQ9GZY8 342 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 TSPAN10Q9H1Z9 355 aaPredicted RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 KCNK15Q9H427 330 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 MED11Q9P086 117 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 ACSL5Q9ULC5 683 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 AUP1Q9Y679 476 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 TRPM6Q9BX84 2022 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 A0A1W2PR48 441 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 IGHA1P01876 353 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 APOC1P02654 83 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 PCCBP05166 539 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 STAT5AP42229 794 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 MMP15P51511 669 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 FOXK2Q01167 660 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 STPG1Q5TH74 334 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SHISA5Q8N114 240 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 CLRN3Q8NCR9 226 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SEC22AQ96IW7 307 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SLC46A2Q9BY10 475 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 HS3ST2Q9Y278 367 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 ABHD14A-ACY1A0A1B0GW23 586 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 GMFGO60234 142 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 LRG1P02750 347 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SBK2P0C263 348 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 LAMP2P13473 410 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 RPL4P36578 427 aaKnown RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 Q6ZNB5 142 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 LRRC56Q8IYG6 542 aaPredicted RBP12.17□□□□□ -0.46
MSH6-214ENST00000616033 LINC00471Q8N535 108 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 TMEM185AQ8NFB2 350 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 SLC38A3Q99624 504 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 TIMP4Q99727 224 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 PIPOXQ9P0Z9 390 aa12.17□□□□□ -0.46
MSH6-214ENST00000616033 TCF20Q9UGU0 1960 aaKnown RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 GUCA2AQ02747 115 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 SLC25A30Q5SVS4 291 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 HAGHLQ6PII5 290 aaPredicted RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 CD300LDQ6UXZ3 194 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 WDR88Q6ZMY6 472 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 DUSP19Q8WTR2 217 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 IL36AQ9UHA7 158 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 RTTNQ86VV8 2226 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 A0A1B0GTH9 108 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 TMEM200CA6NKL6 621 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 KRBOX1C9JBD0 128 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 ATP1B1P05026 303 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms