RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ELOVL1Q9BW60 279 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC12A9Q9BXP2 914 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RCE1Q9Y256 329 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GPR45Q9Y5Y3 372 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TRPM7Q96QT4 1865 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 NRCAMQ92823 1304 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 DCTN6O00399 190 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 HBP1O60381 514 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CKMP06732 381 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 HTR1AP08908 422 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CLINT1Q14677 625 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CTU2Q2VPK5 515 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 C4orf17Q53FE4 359 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SERINC5Q86VE9 423 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RXFP4Q8TDU9 374 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TRAPPC12Q8WVT3 735 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TVP23CQ96ET8 276 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 POFUT1Q9H488 388 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 F6UZH7 168 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 C8GP07360 202 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 STAG3L3P0CL85 134 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PSMB6P28072 239 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 NDUFS1P28331 727 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF763Q0D2J5 394 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 UNC50Q53HI1 259 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RNF44Q7L0R7 432 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC41A2Q96JW4 573 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 MBOAT4Q96T53 435 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PRDM7Q9NQW5 492 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 MANSC4A6NHS7 340 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 HBQ1P09105 142 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SOX18P35713 384 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 POLR2HP52434 150 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SPP2Q13103 211 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ARHGAP19Q14CB8 494 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ACSM3Q53FZ2 586 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 OTUD1Q5VV17 481 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 WDR88Q6ZMY6 472 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GPX8Q8TED1 209 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PGLYRP2Q96PD5 576 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SPIN2AQ99865 258 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SPIN2BQ9BPZ2 258 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SYT17Q9BSW7 474 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ENPP4Q9Y6X5 453 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GPR182O15218 404 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 STK17BO94768 372 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 POP4O95707 220 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RFX2P48378 723 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GSK3AP49840 483 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ILKQ13418 452 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 UBE2V2Q15819 145 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM35AQ53FP2 167 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 FRG2Q64ET8 278 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 Q6ZN92 141 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF550Q7Z398 422 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC39A11Q8N1S5 342 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RELTQ969Z4 430 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 FRG2BQ96QU4 278 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 C11orf84Q9BUA3 381 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SMDT1Q9H4I9 107 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 P2RX2Q9UBL9 471 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 FLVCR2Q9UPI3 526 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SRPX2O60687 465 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 MTHFD2P13995 350 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CD80P33681 288 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 RPS25P62851 125 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 VEZF1Q14119 521 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 HSF5Q4G112 596 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TOMM20LQ6UXN7 152 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 FA2HQ7L5A8 372 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF439Q8NDP4 499 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 FAM46BQ96A09 425 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 BACE2Q9Y5Z0 518 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SBF1O95248 1867 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PLIN4Q96Q06 1357 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 DPM1O60762 260 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ADH1BP00325 375 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 PDYNP01213 254 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ACP2P11117 423 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 UBE2G2P60604 165 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CBLN2Q8IUK8 224 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC38A9Q8NBW4 561 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 REEP6Q96HR9 211 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM134Q9H6X4 195 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 AGO3Q9H9G7 860 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 MCRIP1C9JLW8 97 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 MAFKO60675 156 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 NCR1O76036 304 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 OR5AC1P0C628 307 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CT45A8P0DMV1 189 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CT45A9P0DMV2 189 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TXNP10599 105 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 EPHA1P21709 976 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 UQCRC2P22695 453 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 SLC6A1P30531 599 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 ABRAXAS2Q15018 415 aa4.64□□□□□ -1.67
VPS13D-213ENST00000613099 TARBP2Q15633 366 aaKnown RBP4.64□□□□□ -1.67
VPS13D-213ENST00000613099 CT45A2Q5DJT8 189 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms