RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DHCR7Q9UBM7 475 aaKnown RBP12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 COPS3Q9UNS2 423 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 SLC22A31A6NKX4 558 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR5K4A6NMS3 321 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 C10orf142B7Z368 130 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 PROS1P07225 676 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 PEPDP12955 493 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 ALAS2P22557 587 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 EFNA3P52797 238 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 ACSM1Q08AH1 577 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 FGFBP1Q14512 234 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 TMEM44Q2T9K0 475 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 ZNF544Q6NX49 715 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 SAMD12Q8N8I0 201 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR4M1Q8NGD0 313 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR51Q1Q8NH59 317 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 ABHD4Q8TB40 342 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 GHSRQ92847 366 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 PGLYRP3Q96LB9 341 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 SLC38A3Q99624 504 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 PDCD1LG2Q9BQ51 273 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 SOSTQ9BQB4 213 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 RPS6KB2Q9UBS0 482 aa12.92□□□□□ -0.34
PCDHGA3-202ENST00000612467 CHURC1-FNTBB4DL54 471 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 FMO6PO60774 539 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 CTNSO60931 367 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 MT-ND5P03915 603 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 KRT8P05787 483 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 HK1P19367 917 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 MYL9P24844 172 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 FNTBP49356 437 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 VASH1Q7L8A9 365 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR5H6Q8NGV6 325 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 GFM1Q96RP9 751 aaKnown RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 ENAMQ9NRM1 1142 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 TNRC18O15417 2968 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR6C68A6NDL8 312 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 BLOC1S5-TXNDC5H3BN57 136 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 H7C1C5 153 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 AK1P00568 194 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 CLPSP04118 112 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 THBS2P35442 1172 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 RPS27P42677 84 aaKnown RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 SRP9P49458 86 aaKnown RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 LCN6P62502 163 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 MANEAQ5SRI9 462 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 NANOGNBQ7Z5D8 188 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 C19orf18Q8NEA5 215 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 Q9N2J8 555 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 GPR27Q9NS67 375 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 ACOXLQ9NUZ1 547 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 CHRNA9Q9UGM1 479 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
PCDHGA3-202ENST00000612467 IGHV1OR15-9A0A0B4J2B8 117 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 NPIPB9F8W1W9 429 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 NDUFB5O43674 189 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 SLC6A6P31641 620 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 CAPZBP47756 277 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 CCR5P51681 352 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 AGFG1P52594 562 aaKnown RBP12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 ACSM3Q53FZ2 586 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 MED25Q71SY5 747 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 TSTD1Q8NFU3 115 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 MOGAT1Q96PD6 335 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 DEPDC7Q96QD5 511 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR8D2Q9GZM6 311 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 LMAN1LQ9HAT1 526 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 POLHQ9Y253 713 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 SERINC4A6NH21 518 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 SMLR1H3BR10 107 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 MAP2K3P46734 347 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 ATP12AP54707 1039 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 ULK3Q6PHR2 472 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 C10orf53Q8N6V4 93 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 ZNF615Q8N8J6 731 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 ELF4Q99607 663 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 CTRCQ99895 268 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 GDF15Q99988 308 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 RNF121Q9H920 327 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
PCDHGA3-202ENST00000612467 IGKV1D-42A0A075B6H8 117 aa12.9□□□□□ -0.35
PCDHGA3-202ENST00000612467 A0A0G2JK05 382 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms