RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 FTMTQ8N4E7 242 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TRMT61AQ96FX7 289 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 MSLNLQ96KJ4 702 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PDCD1LG2Q9BQ51 273 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CFHR5Q9BXR6 569 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TPSD1Q9BZJ3 242 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 LYRM4Q9HD34 91 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PLEKHB1Q9UF11 243 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 ZNF337Q9Y3M9 751 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SMAD9O15198 467 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 RAD1O60671 282 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SLC35E2P0CK97 266 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CLUP10909 449 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 GTF2F2P13984 249 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 MAKP20794 623 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CD79BP40259 229 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 EIF1AXP47813 144 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 VASPP50552 380 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 SCGB2B2Q4G0G5 96 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 GALNT6Q8NCL4 622 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 ADOQ96SZ5 270 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 STACQ99469 402 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PELOQ9BRX2 385 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 NXF2Q9GZY0 626 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 SYNPO2LQ9H987 977 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SLC2A4RGQ9NR83 387 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 MED11Q9P086 117 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 RCE1Q9Y256 329 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 MAB21L2Q9Y586 359 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 V9GY05 133 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SCN3AQ9NY46 2000 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 EIF1AYO14602 144 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 EGFP01133 1207 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 OR8G3PP0DMU2 310 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 EN2P19622 333 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 UQCRC1P31930 480 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CTHP32929 405 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PLCXD2Q0VAA5 305 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TOMM20Q15388 145 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 RAB30Q15771 203 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 LRRN1Q6UXK5 716 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SIAH3Q8IW03 269 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TMEM151BQ8IW70 566 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SDR16C5Q8N3Y7 309 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 IL17RCQ8NAC3 791 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 LGALS14Q8TCE9 139 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 BRIX1Q8TDN6 353 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 SLC37A2Q8TED4 501 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 ADAMTS14Q8WXS8 1223 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TOE1Q96GM8 510 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 GPER1Q99527 375 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 ATF6BQ99941 703 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 V9GYH0 126 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TMEM72A0PK05 275 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 CREBL2O60519 120 aaPredicted RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 UBL3O95164 117 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 TCRBP04435 133 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 PNMTP11086 282 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 PTBP1P26599 531 aaKnown RBP eCLIP8.02□□□□□ -1.13
LIG4-204ENST00000611712 HLA-DMAP28067 261 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 CCKBRP32239 447 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 RORAP35398 523 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 AQP2P41181 271 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 MAZP56270 477 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 KIAA1024LP59773 190 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 YPEL5P62699 121 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 EFR3AQ14156 821 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ZIC1Q15915 447 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 FBXO42Q6P3S6 717 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 KCTD18Q6PI47 426 aaPredicted RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 OR13H1Q8NG92 308 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 OR13C5Q8NGS8 318 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 FGF14Q92915 247 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ZNF764Q96H86 408 aaPredicted RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 NIPAL2Q9H841 368 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 C20orf141Q9NUB4 165 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LOC100509620A0A075B734 347 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 CDC42EP2O14613 210 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ARPC1BO15143 372 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 GPRIN2O60269 458 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 EFEMP2O95967 443 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 UBL4AP11441 157 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 CCR6P51684 374 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 E2F1Q01094 437 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 DUSP2Q05923 314 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 SERTAD2Q14140 314 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 AADACL4Q5VUY2 407 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 VN1R4Q7Z5H5 301 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 LNX2Q8N448 690 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 POGLUT1Q8NBL1 392 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 SYNPRQ8TBG9 265 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ZDHHC12Q96GR4 267 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 ALG12Q9BV10 488 aa8.02□□□□□ -1.13
LIG4-204ENST00000611712 GTPBP2Q9BX10 602 aaKnown RBP8.02□□□□□ -1.13
LIG4-204ENST00000611712 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.02□□□□□ -1.139e-8■■■■■ 29.3
LIG4-204ENST00000611712 ATG5Q9H1Y0 275 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms