RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 OIT3Q8WWZ8 545 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 FAM168AQ92567 244 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 PKNOX2Q96KN3 472 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 MUS81Q96NY9 551 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 SAP130Q9H0E3 1048 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 AKTIPQ9H8T0 292 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 TMEM181Q9P2C4 612 aa21.41■■□□□ 1.02
CDKN3-211ENST00000611205 ITM2AO43736 263 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 SCN2BO60939 215 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 GUSBP08236 651 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 SLC25A16P16260 332 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 FKBP2P26885 142 aaKnown RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 CHI3L1P36222 383 aaPredicted RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 CLK1P49759 484 aaKnown RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 LOXL1Q08397 574 aaPredicted RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 ANXA8L1Q5VT79 327 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 SAXO2Q658L1 398 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 ZNF544Q6NX49 715 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 VPS37AQ8NEZ2 397 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 KCNK17Q96T54 332 aa21.4■■□□□ 1.02
CDKN3-211ENST00000611205 EXOSC3Q9NQT5 275 aaKnown RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 MARCOQ9UEW3 520 aaPredicted RBP21.4■■□□□ 1.02
CDKN3-211ENST00000611205 STAB1Q9NY15 2570 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 PRSS51A0A1B0GVH4 220 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 WDR91A4D1P6 747 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 ELOA3DA6NLF2 546 aaPredicted RBP21.39■■□□□ 1.01
CDKN3-211ENST00000611205 FAM157CP0CG43 387 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 PHC1P78364 1004 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 VLDLRP98155 873 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 PLAURQ03405 335 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 ELOA3BQ3SY89 546 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 ZNF781Q8N8C0 355 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 WDR31Q8NA23 367 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 ELOA3Q8NG57 546 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 CNOT9Q92600 299 aaKnown RBP21.39■■□□□ 1.01
CDKN3-211ENST00000611205 DDIT4LQ96D03 193 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 ZIM3Q96PE6 472 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 SLC35A5Q9BS91 424 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 NAA11Q9BSU3 229 aaPredicted RBP21.39■■□□□ 1.01
CDKN3-211ENST00000611205 CDC42EP3Q9UKI2 254 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 SLC9A8Q9Y2E8 581 aa21.39■■□□□ 1.01
CDKN3-211ENST00000611205 TMED7-TICAM2A0A0A6YYA0 188 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 TMEM72A0PK05 275 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 H7C417 338 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 AP3D1O14617 1153 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 PHF1O43189 567 aaPredicted RBP21.38■■□□□ 1.01
CDKN3-211ENST00000611205 ETV4P43268 484 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 HTR3AP46098 478 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 SLC35A1P78382 337 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 NEURL3Q96EH8 262 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 BEX2Q9BXY8 128 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 FKRPQ9H9S5 495 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 SLC7A10Q9NS82 523 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 PARPBPQ9NWS1 579 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 TRAPPC4Q9Y296 219 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 AMDHD2Q9Y303 409 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 TMED7Q9Y3B3 224 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 FLVCR1Q9Y5Y0 555 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 ARFGEF3Q5TH69 2177 aa21.38■■□□□ 1.01
CDKN3-211ENST00000611205 PRAMEF27A3QJZ7 478 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 PDLIM1O00151 329 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 IMPDH2P12268 514 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 BMP4P12644 408 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 POLR2HP52434 150 aaKnown RBP21.37■■□□□ 1.01
CDKN3-211ENST00000611205 H3F3AP84243 136 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 SLC25A3Q00325 362 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 CHRNB3Q05901 458 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 SPANXN4Q5MJ08 99 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 TSPO2Q5TGU0 170 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 ROPN1BQ9BZX4 212 aaPredicted RBP21.37■■□□□ 1.01
CDKN3-211ENST00000611205 AMBRA1Q9C0C7 1298 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 ROPN1Q9HAT0 212 aaPredicted RBP21.37■■□□□ 1.01
CDKN3-211ENST00000611205 SLC17A5Q9NRA2 495 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 DCTN4Q9UJW0 460 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 OSGIN1Q9UJX0 560 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 PMF1-BGLAPU3KQ54 211 aa21.37■■□□□ 1.01
CDKN3-211ENST00000611205 TYROBPO43914 113 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 EIF1BO60739 113 aaKnown RBP21.36■■□□□ 1.01
CDKN3-211ENST00000611205 C1QCP02747 245 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 ZNF16P17020 682 aaPredicted RBP21.36■■□□□ 1.01
CDKN3-211ENST00000611205 TACR3P29371 465 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 CASP8Q14790 479 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 CHI3L2Q15782 390 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 CYB5R2Q6BCY4 276 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 C17orf78Q8N4C9 275 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 C10orf105Q8TEF2 133 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 TESCQ96BS2 214 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 MALRD1Q5VYJ5 2156 aa21.36■■□□□ 1.01
CDKN3-211ENST00000611205 ATP6V1G2-DDX39BF2Z307 99 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 HMGN4O00479 90 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 LY6HO94772 140 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 MYZAPP0CAP1 466 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 CDH2P19022 906 aaPredicted RBP21.35■■□□□ 1.01
CDKN3-211ENST00000611205 APOBEC3AP31941 199 aaPredicted RBP21.35■■□□□ 1.01
CDKN3-211ENST00000611205 EFNA4P52798 201 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 ABCE1P61221 599 aaKnown RBP21.35■■□□□ 1.01
CDKN3-211ENST00000611205 TGFBR3Q03167 851 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 SYPL1Q16563 259 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 AP1ARQ63HQ0 302 aa21.35■■□□□ 1.01
CDKN3-211ENST00000611205 RNF130Q86XS8 419 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms