RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 ALG10BQ5I7T1 473 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 C9orf135Q5VTT2 229 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 CBLN3Q6UW01 205 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 OR13C5Q8NGS8 318 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 SUN3Q8TAQ9 357 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 LRRC20Q8TCA0 184 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 GGHQ92820 318 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 TM4SF19Q96DZ7 209 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 TCTN2Q96GX1 697 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 TNFRSF13CQ96RJ3 184 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 CDADC1Q9BWV3 514 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 GAREM1Q9H706 876 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
CTCFL-222ENST00000609232 TMEM184BQ9Y519 407 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-222ENST00000609232 PCDHGA6Q9Y5G7 932 aa9.07□□□□□ -0.96
CTCFL-222ENST00000609232 HEATR5AQ86XA9 2040 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 FOLR1P15328 257 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 MAD2L1BPQ15013 274 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CLVS2Q5SYC1 327 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 C1QL3Q5VWW1 255 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SLC35D2Q76EJ3 337 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SLC35F3Q8IY50 421 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ENKURQ8TC29 256 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ADAMTS18Q8TE60 1221 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 C5orf34Q96MH7 638 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 DHRS9Q9BPW9 319 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 OR11A1Q9GZK7 315 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 GALNT9Q9HCQ5 603 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 GPR27Q9NS67 375 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CENPMQ9NSP4 180 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 MRPL39Q9NYK5 338 aaKnown RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 FLRT3Q9NZU0 649 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 NOSIPQ9Y314 301 aaKnown RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 PCDHGB1Q9Y5G3 927 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SLC22A7Q9Y694 548 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 COL4A2P08572 1712 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SLC16A6O15403 523 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ZNF749O43361 778 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 DUX1O43812 170 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SEMA7AO75326 666 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 MYDGFQ969H8 173 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 KLHDC3Q9BQ90 382 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SPATA5L1Q9BVQ7 753 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TBL1XR1Q9BZK7 514 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CES1P1Q9UKY3 287 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 PLCL2Q9UPR0 1127 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TECTAO75443 2155 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 EPG5Q9HCE0 2579 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 KALRNO60229 2985 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SRPX2O60687 465 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SLITRK5O94991 958 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 GPR75O95800 540 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ITGA1P56199 1179 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 RPS18P62269 152 aaKnown RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TP53I3Q53FA7 332 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TRIM61Q5EBN2 209 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 TMPRSS11AQ6ZMR5 421 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 RDH10Q8IZV5 341 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 FCGR1BQ92637 280 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 GCDHQ92947 438 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 EMC6Q9BV81 110 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 DUSP15Q9H1R2 295 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 HEATR1Q9H583 2144 aaKnown RBP9.06□□□□□ -0.96
CTCFL-222ENST00000609232 SEC61A2Q9H9S3 476 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 NPAP1Q9NZP6 1156 aa9.06□□□□□ -0.96
CTCFL-222ENST00000609232 FREM3P0C091 2139 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 TLCD2A6NGC4 264 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 ACOD1A6NK06 481 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 CSN2P05814 226 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 RNH1P13489 461 aaKnown RBP9.05□□□□□ -0.96
CTCFL-222ENST00000609232 DDOSTP39656 456 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 RPS5P46782 204 aaKnown RBP9.05□□□□□ -0.96
CTCFL-222ENST00000609232 GMFBP60983 142 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 FAM53BQ14153 422 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 MFSD12Q6NUT3 480 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 GPR155Q7Z3F1 870 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 PLXDC1Q8IUK5 500 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 SLC25A45Q8N413 288 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 DUSP19Q8WTR2 217 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 DNASE2BQ8WZ79 361 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 MR1Q95460 341 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 CREB3L1Q96BA8 519 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 MOAP1Q96BY2 351 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 SENP5Q96HI0 755 aaPredicted RBP9.05□□□□□ -0.96
CTCFL-222ENST00000609232 C7orf34Q96L11 122 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 SAP130Q9H0E3 1048 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 HDHD2Q9H0R4 259 aa9.05□□□□□ -0.96
CTCFL-222ENST00000609232 SCPEP1Q9HB40 452 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms