RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RAP2CQ9Y3L5 183 aa11.77□□□□□ -0.53
POLR2J3-219ENST00000608621 TMED7-TICAM2A0A0A6YYA0 188 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 A8MV72 311 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 M0R1B8 84 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 HMGN4O00479 90 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 AP3D1O14617 1153 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 DNPH1O43598 174 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 SERPINE1P05121 402 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 ITGA5P08648 1049 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 DHRS4L1P0CG22 281 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 CHI3L1P36222 383 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 KHKP50053 298 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 RPL14P50914 215 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 FABP6P51161 128 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 H3F3AP84243 136 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 PLAURQ03405 335 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 RAB35Q15286 201 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 SYPL1Q16563 259 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 C9orf135Q5VTT2 229 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 OR7E24Q6IFN5 339 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 PODNL1Q6PEZ8 512 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 MUC15Q8N387 334 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 OR10H5Q8NGA6 315 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 HTRA1Q92743 480 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC35A5Q9BS91 424 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 UPB1Q9UBR1 384 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 MALT1Q9UDY8 824 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 OSGIN1Q9UJX0 560 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 TMED7Q9Y3B3 224 aa11.76□□□□□ -0.53
POLR2J3-219ENST00000608621 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM72A0PK05 275 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 BIRC5O15392 142 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 EIF1BO60739 113 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 IFNA2P01563 188 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 IMPDH2P12268 514 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 LBPP18428 481 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 S100A3P33764 101 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 HTR3AP46098 478 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC1A6P48664 564 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 DSCR9P59020 149 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC35A1P78382 337 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 HPCAP84074 193 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 FAM174BQ3ZCQ3 159 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 B3GLCTQ6Y288 498 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 RNF130Q86XS8 419 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 ANKFN1Q8N957 763 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 AENQ8WTP8 325 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 PMM1Q92871 262 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 DDIT4LQ96D03 193 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 TEX37Q96LM6 180 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 SORT1Q99523 831 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 NAA11Q9BSU3 229 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM109Q9BVC6 243 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 NUF2Q9BZD4 464 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC38A1Q9H2H9 487 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC7A10Q9NS82 523 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 PARPBPQ9NWS1 579 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
POLR2J3-219ENST00000608621 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 A0A096LNT2 108 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 PDLIM1O00151 329 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 ZNF208O43345 1280 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 TACR3P29371 465 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 POLR2HP52434 150 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 CLNS1AP54105 237 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 NME5P56597 212 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 UFM1P61960 85 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 DPY19L1Q2PZI1 675 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 CHRFAM7AQ494W8 412 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 TSPO2Q5TGU0 170 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 LRRC74BQ6ZQY2 392 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 CCDC115Q96NT0 180 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 TRNT1Q96Q11 434 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 TNFRSF13CQ96RJ3 184 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 INPP5KQ9BT40 448 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC17A5Q9NRA2 495 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 PNPOQ9NVS9 261 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 BTNL2Q9UIR0 455 aa11.74□□□□□ -0.53
POLR2J3-219ENST00000608621 ZC3H12DA2A288 527 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 AGAP5A6NIR3 686 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ELOA3DA6NLF2 546 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 E9PBE3 544 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 CHRM4P08173 479 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 IL7RP16871 459 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 BGNP21810 368 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC1A3P43003 542 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms