RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CXCR1P25024 350 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 UGT2B10P36537 528 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 ADRM1Q16186 407 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 INTS11Q5TA45 600 aaKnown RBP17.13■□□□□ 0.33
SRSF4-206ENST00000605204 ABLIM2Q6H8Q1 611 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 CDH24Q86UP0 819 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 CLIP4Q8N3C7 705 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 ZNF610Q8N9Z0 462 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 PIGXQ8TBF5 258 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 C10orf82Q8WW14 230 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 POTEKPQ9BYX7 375 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 KAT8Q9H7Z6 458 aaKnown RBP17.13■□□□□ 0.33
SRSF4-206ENST00000605204 ZNF226Q9NYT6 803 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 TESMINQ9Y4I5 508 aa17.13■□□□□ 0.33
SRSF4-206ENST00000605204 PCNX3Q9H6A9 2034 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 CASKO14936 926 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 GKN3PP0CG01 181 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 CD1EP15812 388 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 MTPNP58546 118 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 SLC35A1P78382 337 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 RASGEF1BQ0VAM2 473 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 C10orf111Q8N326 155 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 USB1Q9BQ65 265 aaKnown RBP17.12■□□□□ 0.33
SRSF4-206ENST00000605204 PSD2Q9BQI7 771 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 NSRP1Q9H0G5 558 aaKnown RBP17.12■□□□□ 0.33
SRSF4-206ENST00000605204 C12orf10Q9HB07 376 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 GID8Q9NWU2 228 aa17.12■□□□□ 0.33
SRSF4-206ENST00000605204 TESQ9UGI8 421 aaKnown RBP17.12■□□□□ 0.33
SRSF4-206ENST00000605204 IGKV3D-15A0A087WSY6 115 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 GPR171O14626 319 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 MRASO14807 208 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 CNOT4O95628 575 aaKnown RBP17.11■□□□□ 0.33
SRSF4-206ENST00000605204 PCBP3P57721 371 aaKnown RBP17.11■□□□□ 0.33
SRSF4-206ENST00000605204 NCALDP61601 193 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 FAM27E3Q08E93 113 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 C5orf46Q6UWT4 87 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 PATL1Q86TB9 770 aaKnown RBP17.11■□□□□ 0.33
SRSF4-206ENST00000605204 ARMC8Q8IUR7 673 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 CADM2Q8N3J6 435 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 LSMEM1Q8N8F7 131 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 LRRC58Q96CX6 371 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 NAA11Q9BSU3 229 aaPredicted RBP17.11■□□□□ 0.33
SRSF4-206ENST00000605204 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
SRSF4-206ENST00000605204 CHST2Q9Y4C5 530 aa17.11■□□□□ 0.33
SRSF4-206ENST00000605204 ZNF469Q96JG9 3925 aaPredicted RBP17.1■□□□□ 0.33
SRSF4-206ENST00000605204 A8MVM7 634 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 FBP2O00757 339 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 GPIP06744 558 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 PSMB1P20618 241 aaKnown RBP17.1■□□□□ 0.33
SRSF4-206ENST00000605204 PCGF2P35227 344 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 IDUAP35475 653 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 SLC16A1P53985 500 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 SNTB1Q13884 538 aaKnown RBP17.1■□□□□ 0.33
SRSF4-206ENST00000605204 REP15Q6BDI9 236 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 C6orf89Q6UWU4 347 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 TFAP2EQ6VUC0 442 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 PTOV1Q86YD1 416 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 TUSC5Q8IXB3 177 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 LINC01560Q8TB33 94 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 DNAJA4Q8WW22 397 aaPredicted RBP17.1■□□□□ 0.33
SRSF4-206ENST00000605204 RASSF5Q8WWW0 418 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 ARL5BQ96KC2 179 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 MED18Q9BUE0 208 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 HDHD5Q9BXW7 423 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 POLDIP3Q9BY77 421 aaKnown RBP17.1■□□□□ 0.33
SRSF4-206ENST00000605204 TRIM2Q9C040 744 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 OR11A1Q9GZK7 315 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 RPS6KB2Q9UBS0 482 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 AP3M1Q9Y2T2 418 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 GPR52Q9Y2T5 361 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 MED12LQ86YW9 2145 aa17.1■□□□□ 0.33
SRSF4-206ENST00000605204 TMEM72A0PK05 275 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 C8BP07358 591 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 PNMTP11086 282 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 PRG2P13727 222 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 CCKARP32238 428 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 OR2B6P58173 313 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 H3F3AP84243 136 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 P2RY6Q15077 328 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 FBXW10Q5XX13 1052 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 NANOGP8Q6NSW7 305 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 ERICH5Q6P6B1 374 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 PAQR6Q6TCH4 344 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 ARPINQ7Z6K5 226 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 GALNT5Q7Z7M9 940 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 SNX32Q86XE0 403 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 RP9Q8TA86 221 aaKnown RBP17.09■□□□□ 0.33
SRSF4-206ENST00000605204 STK35Q8TDR2 534 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 C3orf49Q96BT1 292 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 C12orf49Q9H741 205 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 NANOGQ9H9S0 305 aa17.09■□□□□ 0.33
SRSF4-206ENST00000605204 IGHV3-15A0A0B4J1V0 119 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 FXYD1O00168 92 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 MFN2O95140 757 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 CCNA2P20248 432 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 AQP1P29972 269 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 OR3A2P47893 321 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 RGS8P57771 180 aaPredicted RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 CAPRIN1Q14444 709 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms