RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 H2AFY2Q9P0M6 372 aaPredicted RBP17.46■□□□□ 0.39
TUBB4B-202ENST00000604929 PCDHGA3Q9Y5H0 932 aa17.46■□□□□ 0.39
TUBB4B-202ENST00000604929 ASPMQ8IZT6 3477 aa17.46■□□□□ 0.38
TUBB4B-202ENST00000604929 OR7A10O76100 309 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 CD63P08962 238 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 HSMCR30P0CW71 290 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ADORA3P0DMS8 318 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 PIPP12273 146 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 LTBQ06643 244 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 EIF3IQ13347 325 aaKnown RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 MED22Q15528 200 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 TBCEQ15813 527 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 AADACL4Q5VUY2 407 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 UBE2UQ5VVX9 321 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 OR5M11Q96RB7 305 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 NPAS1Q99742 590 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 LRFN3Q9BTN0 628 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 TMEM43Q9BTV4 400 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 CDCA4Q9BXL8 241 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 SLC19A3Q9BZV2 496 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 NANSQ9NR45 359 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 TAS2R10Q9NYW0 307 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ZNF337Q9Y3M9 751 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ZC3H12DA2A288 527 aaKnown RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 KDM4EB2RXH2 506 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 MCIDASD6RGH6 385 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 FBXO45P0C2W1 286 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 RPL4P36578 427 aaKnown RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 MTNR1AP48039 350 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 GAS1P54826 345 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 CDH11P55287 796 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 IRF3Q14653 427 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 SSPNQ14714 243 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ZNF74Q16587 644 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ZNF362Q5T0B9 420 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 PAQR6Q6TCH4 344 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 CXXC5Q7LFL8 322 aaKnown RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 MISPQ8IVT2 679 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 CYB561A3Q8NBI2 242 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 OR52I1Q8NGK6 324 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ZNF420Q8TAQ5 688 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 TAAR8Q969N4 342 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 LGALS12Q96DT0 336 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 SPACA9Q96E40 222 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 ERMAPQ96PL5 475 aaPredicted RBP17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 DCUN1D5Q9BTE7 237 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 TAPBPLQ9BX59 468 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 HCAR1Q9BXC0 346 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 MED17Q9NVC6 651 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 VDAC3Q9Y277 283 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 HRH3Q9Y5N1 445 aa17.45■□□□□ 0.38
TUBB4B-202ENST00000604929 RIF1Q5UIP0 2472 aaKnown RBP17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 EXPH5Q8NEV8 1989 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 SNTNA6NMZ2 147 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 M0R082 166 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 NDUFB2O95178 105 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 SLC6A6P31641 620 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 PEX19P40855 299 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 NTRK2Q16620 822 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 TIGD6Q17RP2 521 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 ARSKQ6UWY0 536 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 PTP4A1Q93096 173 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 CCNL2Q96S94 520 aaPredicted RBP17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 COL25A1Q9BXS0 654 aaPredicted RBP17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 ADAM18Q9Y3Q7 739 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 IER3IP1Q9Y5U9 82 aa17.44■□□□□ 0.38
TUBB4B-202ENST00000604929 IGHEP01854 428 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 RAB40ALP0C0E4 278 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 GRK5P34947 590 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 DLSTP36957 453 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 LIPAP38571 399 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 CASP3P42574 277 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 TMBIM6P55061 237 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 LSM3P62310 102 aaKnown RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 PRAMEF20Q5VT98 475 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 ADGRG3Q86Y34 549 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 MOSPD2Q8NHP6 518 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 CMC2Q9NRP2 79 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 MRPS18BQ9Y676 258 aaKnown RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 TMED7-TICAM2A0A0A6YYA0 188 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 NOL3O60936 208 aaKnown RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 LRP3O75074 770 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 SLC25A12O75746 678 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 DKK1O94907 266 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 FTH1P19P0C7X4 201 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 PEPDP12955 493 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 TCEA1P23193 301 aaKnown RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 AQP2P41181 271 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 PTGDSP41222 190 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 DOC2BQ14184 412 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 ZNF791Q3KP31 576 aaPredicted RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 KLHL12Q53G59 568 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 KLHL22Q53GT1 634 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 NXNL2Q5VZ03 156 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 GLRX5Q86SX6 157 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 RPS19BP1Q86WX3 136 aaKnown RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 GHDCQ8N2G8 530 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 ESX1Q8N693 406 aa17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 NLGN4YQ8NFZ3 816 aaPredicted RBP17.43■□□□□ 0.38
TUBB4B-202ENST00000604929 OR4K13Q8NH42 304 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms