RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 ACSM3Q53FZ2 586 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF57Q68EA5 555 aaPredicted RBP10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MZT2AQ6P582 158 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PLET1Q6UQ28 207 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RELTQ969Z4 430 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 KIAA1143Q96AT1 154 aaPredicted RBP10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF524Q96C55 264 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RASD2Q96D21 266 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TMEM43Q9BTV4 400 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ENAMQ9NRM1 1142 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 NPAP1Q9NZP6 1156 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 FBXL21Q9UKT6 434 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 EML5Q05BV3 1969 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 C17orf51A8MQB3 221 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CLDN4O14493 209 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OIP5O43482 229 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 THBS2P35442 1172 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MTNR1BP49286 362 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ERVK-25P63136 954 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 QPRTQ15274 297 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 DEFB133Q30KQ1 61 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZFP69Q49AA0 526 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SFXN4Q6P4A7 337 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CBLN3Q6UW01 205 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CNTRLQ7Z7A1 2325 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR4M1Q8NGD0 313 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR51Q1Q8NH59 317 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SLC35B4Q969S0 331 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 NECTIN4Q96NY8 510 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SLC38A3Q99624 504 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GPR27Q9NS67 375 aa10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MRPS33Q9Y291 106 aaKnown RBP10.82□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 FAM240BA0A1B0GVZ2 78 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SERINC4A6NH21 518 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IDSB3KWA1 339 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 LYRM1O43325 122 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IDH3BO43837 385 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SELENOFO60613 162 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PRAMEF2O60811 474 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PROS1P07225 676 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SDHBP21912 280 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 F8A1P23610 371 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PSMB10P40306 273 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MAGEB1P43366 347 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 BLKP51451 505 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CD226Q15762 336 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF141Q15928 474 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TATDN3Q17R31 274 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 HBMQ6B0K9 141 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR6K6Q8NGW6 343 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PDCD1LG2Q9BQ51 273 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 HDHD2Q9H0R4 259 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PLSCR3Q9NRY6 295 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RBFOX1Q9NWB1 397 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 A0A087WV48 116 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR6C68A6NDL8 312 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 HMX3A6NHT5 357 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 BLOC1S5-TXNDC5H3BN57 136 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SRPX2O60687 465 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 NDUFB2O95178 105 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IFNGP01579 166 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ALAS2P22557 587 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CAPZBP47756 277 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR1D4P47884 311 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 INPP1P49441 399 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RACK1P63244 317 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MRPS15P82914 257 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RNASE12Q5GAN4 147 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ARHGAP11AQ6P4F7 1023 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MED25Q71SY5 747 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 OR4D9Q8NGE8 314 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SLC7A6Q92536 515 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PMM1Q92871 262 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 UPRTQ96BW1 309 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 SGTBQ96EQ0 304 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PELI1Q96FA3 418 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 TSSK2Q96PF2 358 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GFM1Q96RP9 751 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF576Q9H609 170 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 MKKSQ9NPJ1 570 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PNO1Q9NRX1 252 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 COPS3Q9UNS2 423 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 COL4A2P08572 1712 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 A0A0G2JK05 382 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 CHURC1-FNTBB4DL54 471 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GAAP10253 952 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 IGFBP4P22692 258 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 RBM34P42696 430 aaKnown RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 FNTBP49356 437 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 APOOLQ6UXV4 268 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ESPNLQ6ZVH7 1005 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF550Q7Z398 422 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 GPALPP1Q8IXQ4 340 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF595Q8IYB9 648 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 PRR22Q8IZ63 422 aa10.81□□□□□ -0.68
HMGN3-AS1-201ENST00000604516 ZNF615Q8N8J6 731 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms