RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SMR3AQ99954 134 aa14.48□□□□□ -0.09
TUBE1-206ENST00000603722 USB1Q9BQ65 265 aaKnown RBP14.48□□□□□ -0.09
TUBE1-206ENST00000603722 EBF4Q9BQW3 602 aa14.48□□□□□ -0.09
TUBE1-206ENST00000603722 PAIP1Q9H074 479 aaKnown RBP14.48□□□□□ -0.09
TUBE1-206ENST00000603722 ESRP2Q9H6T0 727 aaKnown RBP14.48□□□□□ -0.09
TUBE1-206ENST00000603722 CACYBPQ9HB71 228 aaKnown RBP14.48□□□□□ -0.09
TUBE1-206ENST00000603722 NGBQ9NPG2 151 aa14.48□□□□□ -0.09
TUBE1-206ENST00000603722 RNF115Q9Y4L5 304 aa14.48□□□□□ -0.09
TUBE1-206ENST00000603722 MTORP42345 2549 aa14.48□□□□□ -0.09
TUBE1-206ENST00000603722 TMEM247A6NEH6 219 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 CD3EP07766 207 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 NUDT7P0C024 238 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 GGT1P19440 569 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 ADSLP30566 484 aaPredicted RBP14.47□□□□□ -0.09
TUBE1-206ENST00000603722 PTH2RP49190 550 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 IDH3AP50213 366 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 NCMAPQ5T1S8 102 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 RNF220Q5VTB9 566 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 CADM2Q8N3J6 435 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 ZNF611Q8N823 705 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 TMEM171Q8WVE6 324 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 DYDC1Q8WWB3 177 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 IGFBPL1Q8WX77 278 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 APH1AQ96BI3 265 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 GSX2Q9BZM3 304 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 THUMPD1Q9NXG2 353 aaKnown RBP14.47□□□□□ -0.09
TUBE1-206ENST00000603722 TRAPPC4Q9Y296 219 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 PCDHB14Q9Y5E9 798 aa14.47□□□□□ -0.09
TUBE1-206ENST00000603722 NR5A2O00482 541 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 GPR171O14626 319 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 TGDSO95455 350 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 CNOT4O95628 575 aaKnown RBP14.46□□□□□ -0.09
TUBE1-206ENST00000603722 THBS1P07996 1170 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 INHBBP09529 407 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 NTF4P34130 210 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 MRPL19P49406 292 aaKnown RBP14.46□□□□□ -0.09
TUBE1-206ENST00000603722 SLC16A1P53985 500 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 AQP5P55064 265 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 SLC35A1P78382 337 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 BSPH1Q075Z2 132 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 LARS2Q15031 903 aaKnown RBP14.46□□□□□ -0.09
TUBE1-206ENST00000603722 PPA1Q15181 289 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 RGNQ15493 299 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 FBXW9Q5XUX1 488 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 ADAM5Q6NVV9 412 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 CASP12Q6UXS9 341 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 BIVMQ86UB2 503 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 CLIP4Q8N3C7 705 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 LILRB1Q8NHL6 650 aaPredicted RBP14.46□□□□□ -0.09
TUBE1-206ENST00000603722 NEUROG1Q92886 237 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 MAL2Q969L2 176 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 ADAM19Q9H013 955 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 CXorf56Q9H5V9 222 aa14.46□□□□□ -0.09
TUBE1-206ENST00000603722 A0A096LPI6 279 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 A0A0G2JPF8 293 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 HNRNPCL2B2RXH8 293 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 HNRNPCL3B7ZW38 293 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CLIC1O00299 241 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 EIF1BO60739 113 aaKnown RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 HNRNPCL1O60812 293 aaKnown RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 MRPL33O75394 65 aaKnown RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 RAD51DO75771 328 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 HNRNPCL4P0DMR1 293 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 PRG2P13727 222 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 HOXB9P17482 250 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 NCF2P19878 526 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CXCR1P25024 350 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 IDUAP35475 653 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 ACAA2P42765 397 aaKnown RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 MAP2K6P52564 334 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 COPZ1P61923 177 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 H3F3AP84243 136 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 ZNF311Q5JNZ3 666 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 TIMM23BQ5SRD1 257 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 WBP2NLQ6ICG8 309 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 PRSS57Q6UWY2 283 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 SERPINA11Q86U17 422 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 FUNDC1Q8IVP5 155 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CIARTQ8N365 385 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 ZNF433Q8N7K0 673 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 GOLGA6L1Q8N7Z2 621 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 KBTBD8Q8NFY9 601 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 MUCL1Q96DR8 90 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 NAA11Q9BSU3 229 aaPredicted RBP14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CCDC28BQ9BUN5 200 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 SPATA9Q9BWV2 254 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 RAD21L1Q9H4I0 556 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 A4GALTQ9NPC4 353 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 SLC25A37Q9NYZ2 338 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CCDC167Q9P0B6 97 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 LAMP3Q9UQV4 416 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 CHST2Q9Y4C5 530 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 ABCA4P78363 2273 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 MPDZO75970 2070 aa14.45□□□□□ -0.1
TUBE1-206ENST00000603722 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
TUBE1-206ENST00000603722 CIB4A0PJX0 185 aa14.44□□□□□ -0.1
TUBE1-206ENST00000603722 DPRXA6NFQ7 191 aa14.44□□□□□ -0.1
TUBE1-206ENST00000603722 TRIM64A6NGJ6 449 aa14.44□□□□□ -0.1
TUBE1-206ENST00000603722 TRIM64BA6NI03 449 aa14.44□□□□□ -0.1
TUBE1-206ENST00000603722 OR5H1A6NKK0 313 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms