RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 RAC1P63000 192 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 MERTKQ12866 999 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 PIN1Q13526 163 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 ALG10BQ5I7T1 473 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 C3orf33Q6P1S2 294 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 GDF7Q7Z4P5 450 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 FJX1Q86VR8 437 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 ADGRG3Q86Y34 549 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 CADM2Q8N3J6 435 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 OR14L1PQ8NHC6 308 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 STK35Q8TDR2 534 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC41A3Q96GZ6 507 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 HS6ST2Q96MM7 605 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 GPR137Q96N19 417 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 FUZQ9BT04 418 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 TMEM43Q9BTV4 400 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 FNDC11Q9BVV2 318 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 NMNAT1Q9HAN9 279 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 SERINC1Q9NRX5 453 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 AGPAT4Q9NRZ5 378 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 MAN2C1Q9NTJ4 1040 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 CHRNA9Q9UGM1 479 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 AURKCQ9UQB9 309 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 SPIN1Q9Y657 262 aaPredicted RBP10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 AP4B1Q9Y6B7 739 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 V9GYQ6 96 aa10.5□□□□□ -0.73
CHMP2A-207ENST00000600804 TMED7-TICAM2A0A0A6YYA0 188 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 TRGV5A0A0B4J1U4 118 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 CPSF4LA6NMK7 179 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 GJE1A6NN92 205 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 ANKRD65E5RJM6 399 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 hCG_2039718K7EN88 272 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 EFNA2O43921 213 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 NPIPB7O75200 414 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 ENTPD5O75356 428 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 DEAF1O75398 565 aaPredicted RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 H1F0P07305 194 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 CELA3AP09093 270 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 LIMS1P48059 325 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 TRAM2Q15035 370 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 TOMM20Q15388 145 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 WIPI1Q5MNZ9 446 aaPredicted RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 RAET1LQ5VY80 246 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 VASNQ6EMK4 673 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 OR2T5Q6IEZ7 315 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 ARHGAP11AQ6P4F7 1023 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 YRDCQ86U90 279 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 RNF113BQ8IZP6 322 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 GHDCQ8N2G8 530 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 OR2T29Q8NH02 315 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 OR6S1Q8NH40 331 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 SFXN2Q96NB2 322 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 PRSS27Q9BQR3 290 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 POTEKPQ9BYX7 375 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 S100A14Q9HCY8 104 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 CTPS2Q9NRF8 586 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 DNAJB9Q9UBS3 223 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 TMED7Q9Y3B3 224 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 VPS13CQ709C8 3753 aa10.49□□□□□ -0.73
CHMP2A-207ENST00000600804 HCFC1P51610 2035 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 A8MVM7 634 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 NPIPA5E9PKD4 350 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 H3BNX3 289 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 J3KTA2 159 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 GMFGO60234 142 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 PEPDP12955 493 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 CPN1P15169 458 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 CXCR1P25024 350 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 FASP25445 335 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 LHX2P50458 406 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ELF3P78545 371 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 CRYZQ08257 329 aaKnown RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ATP6AP1Q15904 470 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 LINC00471Q8N535 108 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC7A13Q8TCU3 470 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ITLN2Q8WWU7 325 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ACOT11Q8WXI4 607 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ABTB1Q969K4 478 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 NRBF2Q96F24 287 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 EPYCQ99645 322 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 NPAS1Q99742 590 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 PRDM14Q9GZV8 571 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 DEFB127Q9H1M4 99 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC6A15Q9H2J7 730 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 SLC7A7Q9UM01 511 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 NPIPA1Q9UND3 350 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 RPH3AQ9Y2J0 694 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 HDGFL3Q9Y3E1 203 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 ZNF337Q9Y3M9 751 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 LIPGQ9Y5X9 500 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 LYVE1Q9Y5Y7 322 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 KIAA1549Q9HCM3 1950 aa10.48□□□□□ -0.73
CHMP2A-207ENST00000600804 IGKV1D-42A0A075B6H8 117 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ARRDC5A6NEK1 342 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 ELOA3DA6NLF2 546 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 CLOCKO15516 846 aa10.47□□□□□ -0.73
CHMP2A-207ENST00000600804 DNPH1O43598 174 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms