RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NPIPB7O75200 414 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 FKBP6O75344 327 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 THRBP10828 461 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 IMPDH2P12268 514 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 UQCRFS1P47985 274 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 LSM11P83369 360 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 RBPJQ06330 500 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF585AQ6P3V2 769 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 PLXDC2Q6UX71 529 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 MEIOBQ8N635 442 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 GALNT11Q8NCW6 608 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 OR2V1Q8NHB1 315 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 TMEM255BQ8WV15 326 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 DUS3LQ96G46 650 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF845Q96IR2 970 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 OR5B2Q96R09 309 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF426Q9BUY5 554 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 ALKBH4Q9NXW9 302 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 GJE1A6NN92 205 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 A8MVM7 634 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 CXCL13O43927 109 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 H1F0P07305 194 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 GNLYP22749 145 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 UGT2B15P54855 530 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 SPIBQ01892 262 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 MYBPHQ13203 477 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 TRAM2Q15035 370 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 ESPNLQ6ZVH7 1005 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 DOLPP1Q86YN1 238 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 PM20D2Q8IYS1 436 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 OR10D3Q8NH80 312 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 STK35Q8TDR2 534 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 KTI12Q96EK9 354 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 MPP4Q96JB8 637 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 PTDSS2Q9BVG9 487 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 SRXN1Q9BYN0 137 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 POTEKPQ9BYX7 375 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 VNN3Q9NY84 501 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 TINAGQ9UJW2 476 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 MPDZO75970 2070 aa17.97■□□□□ 0.47
SHKBP1-222ENST00000600320 KLK2P20151 261 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 SLC7A1P30825 629 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 RRM2P31350 389 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 IFNA8P32881 189 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 EIF1AXP47813 144 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 MAP2K6P52564 334 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 C1orf140Q5VVS0 124 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 HBMQ6B0K9 141 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 TMPPEQ6ZT21 453 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 DDIT4LQ96D03 193 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF347Q96SE7 839 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 FUZQ9BT04 418 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 TMEM43Q9BTV4 400 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 STOML1Q9UBI4 398 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 SH3BGRL2Q9UJC5 107 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 OSGIN2Q9Y236 505 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 HDGFL3Q9Y3E1 203 aa17.96■□□□□ 0.47
SHKBP1-222ENST00000600320 TRBV4-1A0A0J9YWV2 114 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 CLCA1A8K7I4 914 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 AHRRA9YTQ3 701 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PYCARD-AS1I3L0S3 204 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 KPNA4O00629 521 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PRRG2O14669 202 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 RRP9O43818 475 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PIP5K1CO60331 668 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 TIPRLO75663 272 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 CLK1P49759 484 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 LTBQ06643 244 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 ACSF3Q4G176 576 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 RTL6Q6ICC9 239 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PODNL1Q6PEZ8 512 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 C3P1Q6ZMU1 363 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 RPRMLQ8N4K4 120 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 OR52J3Q8NH60 311 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PFN4Q8NHR9 129 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 TMEM239Q8WW34 195 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 PYDC1Q8WXC3 89 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 OSTF1Q92882 214 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 MEPEQ9NQ76 525 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 FAM215AQ9Y5M1 114 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 KIAA1549Q9HCM3 1950 aa17.95■□□□□ 0.46
SHKBP1-222ENST00000600320 GCN1Q92616 2671 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 A0A087WUU8 490 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 A0A1W2PRQ8 180 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 ENTPD5O75356 428 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 GADD45GO95257 159 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 AHSA1O95433 338 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 FKBP2P26885 142 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 IDUAP35475 653 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 RBM34P42696 430 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 RPS5P46782 204 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 DIO1P49895 249 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 RPS3AP61247 264 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 PPP1R8Q12972 351 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 DGCR6Q14129 220 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 SEC23BQ15437 767 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 FGD3Q5JSP0 725 aa17.94■□□□□ 0.46
SHKBP1-222ENST00000600320 OR2T5Q6IEZ7 315 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms