RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DIO1P49895 249 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 MVDP53602 400 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 RPS4XP62701 263 aaKnown RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 CSNK2A1P68400 391 aaPredicted RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 LRRC74AQ0VAA2 488 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 KLF10Q13118 480 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 SYPL1Q16563 259 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 GPAT3Q53EU6 434 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 NCMAPQ5T1S8 102 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 METTL21CQ5VZV1 264 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 TYW3Q6IPR3 259 aaKnown RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 SPATA21Q7Z572 469 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 ZNF563Q8TA94 476 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 ZNF300Q96RE9 604 aaPredicted RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 TPT1P8Q9HAU6 139 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 ACER3Q9NUN7 267 aa16.6■□□□□ 0.25
PNKP-213ENST00000599543 ING1Q9UK53 422 aaPredicted RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 SPIN1Q9Y657 262 aaPredicted RBP16.6■□□□□ 0.25
PNKP-213ENST00000599543 A0A1W2PP18 115 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 ZNF724A8MTY0 619 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 LYZL6O75951 148 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 FESP07332 822 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 GUSBP08236 651 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 ZCCHC18P0CG32 403 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 PGM1P36871 562 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 STK11Q15831 433 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 MAPK14Q16539 360 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 ADAM5Q6NVV9 412 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 TMPPEQ6ZT21 453 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 C10orf111Q8N326 155 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 FAM71CQ8NEG0 241 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 ZNF775Q96BV0 537 aaPredicted RBP16.59■□□□□ 0.25
PNKP-213ENST00000599543 ROPN1LQ96C74 230 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 EMC3Q9P0I2 261 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 VAPAQ9P0L0 249 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 PRSS50Q9UI38 385 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 PLCE1Q9P212 2302 aa16.59■□□□□ 0.25
PNKP-213ENST00000599543 GMNCA6NCL1 334 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 CLIC1O00299 241 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 KRT75O95678 551 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 NUDT7P0C024 238 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 TFPIP10646 304 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 RYKP34925 604 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 APOBEC1P41238 236 aaKnown RBP16.58■□□□□ 0.24
PNKP-213ENST00000599543 BSPH1Q075Z2 132 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 FRRS1Q6ZNA5 592 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 CPLX4Q7Z7G2 160 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 GALNT5Q7Z7M9 940 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 LSRQ86X29 649 aaPredicted RBP16.58■□□□□ 0.24
PNKP-213ENST00000599543 ZNF100Q8IYN0 542 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 CCDC106Q9BWC9 280 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 IKZF5Q9H5V7 419 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.58■□□□□ 0.24
PNKP-213ENST00000599543 CHRNA9Q9UGM1 479 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 LEF1Q9UJU2 399 aaPredicted RBP16.58■□□□□ 0.24
PNKP-213ENST00000599543 NDUFAF1Q9Y375 327 aa16.58■□□□□ 0.24
PNKP-213ENST00000599543 FBP2O00757 339 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 ANGPT2O15123 496 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 CHRM4P08173 479 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 PCSK6P29122 969 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 IRX1P78414 480 aaPredicted RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 CHRNEQ04844 493 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 PPA1Q15181 289 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 ZNF672Q499Z4 452 aaPredicted RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 RPS26P11Q5JNZ5 115 aaPredicted RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 LRIF1Q5T3J3 769 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 ABLIM2Q6H8Q1 611 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 GRINAQ7Z429 371 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 ATG4DQ86TL0 474 aaPredicted RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 SNX32Q86XE0 403 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 POU5F2Q8N7G0 328 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 LILRB1Q8NHL6 650 aaPredicted RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 GTPBP3Q969Y2 492 aaKnown RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 ZG16BQ96DA0 208 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 MUCL1Q96DR8 90 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 TRMT61AQ96FX7 289 aaKnown RBP16.57■□□□□ 0.24
PNKP-213ENST00000599543 SAP130Q9H0E3 1048 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 CTPS2Q9NRF8 586 aa16.57■□□□□ 0.24
PNKP-213ENST00000599543 LOC100653049A0A140TA62 436 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 BCAS1O75363 584 aaPredicted RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 KRT34O76011 436 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 SOD3P08294 240 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 NR2F1P10589 423 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 GGT1P19440 569 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 FKBP2P26885 142 aaKnown RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 DSTNP60981 165 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 PPP2R2BQ00005 443 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 NFYCQ13952 458 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 SELPLGQ14242 412 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 MAPK11Q15759 364 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 SEZ6L2Q6UXD5 910 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 DLEU7Q6UYE1 221 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 SSX8Q7RTT4 187 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 MTDHQ86UE4 582 aaKnown RBP16.56■□□□□ 0.24
PNKP-213ENST00000599543 KBTBD8Q8NFY9 601 aa16.56■□□□□ 0.24
PNKP-213ENST00000599543 SMAP2Q8WU79 429 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms