RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 REM1O75628 298 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 NGFRP08138 427 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 NCK1P16333 377 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 DPP4P27487 766 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF141Q15928 474 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 TMEM249Q2WGJ8 235 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 BEX5Q5H9J7 111 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 NUP54Q7Z3B4 507 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 DND1Q8IYX4 353 aaKnown RBP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 AKAP1Q92667 903 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 WNT2BQ93097 391 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 EFHD2Q96C19 240 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 COL21A1Q96P44 957 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 RAB3IPQ96QF0 476 aaPredicted RBP12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ADOQ96SZ5 270 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ADAM19Q9H013 955 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 UBQLN3Q9H347 655 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 MGAM2Q2M2H8 2515 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 MED12LQ86YW9 2145 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 M0QX08 132 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 GNB5O14775 395 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 GSTA4O15217 222 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 FADS1O60427 444 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 TMCC2O75069 709 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 UGT2B17O75795 530 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 MFN2O95140 757 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 UTS2O95399 124 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 IGHV4-39P01824 125 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 ATP6V1B2P21281 511 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 ATP6V1C1P21283 382 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 TBXA2RP21731 343 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 GCKP35557 465 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 TMED10P49755 219 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 ATP12AP54707 1039 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 HPCAP84074 193 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 EFR3AQ14156 821 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 GPR68Q15743 365 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 MAPK14Q16539 360 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 DESI1Q6ICB0 168 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 TMEM81Q6P7N7 255 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 GALNT10Q86SR1 603 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 DHFR2Q86XF0 187 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 OR4C3Q8NH37 302 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 FIG4Q92562 907 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 TAMM41Q96BW9 452 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 CCDC124Q96CT7 223 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 KLHL4Q9C0H6 718 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 HOXD1Q9GZZ0 328 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 DCAF13Q9NV06 445 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 CLCF1Q9UBD9 225 aa12.42□□□□□ -0.42
SHKBP1-218ENST00000598907 IGHV4-30-2A0A087WSY4 118 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 CENPVL1A0A0U1RR11 272 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 TCRBV5S2A0A599 114 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 THBS1P07996 1170 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 PABPC4LP0CB38 370 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 IL12BP29460 328 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 AQP1P29972 269 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 THBS2P35442 1172 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 KRT20P35900 424 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 FBXW4P57775 412 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 FAPQ12884 760 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 GRAMD1BQ3KR37 738 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 KLHL26Q53HC5 615 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 TBCELQ5QJ74 424 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 FNDC7Q5VTL7 733 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 LIPNQ5VXI9 398 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 ALKBH2Q6NS38 261 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 P4HA3Q7Z4N8 544 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 KRT73Q86Y46 540 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 PLPPR2Q96GM1 343 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 HS6ST2Q96MM7 605 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 NODALQ96S42 347 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 QRSL1Q9H0R6 528 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 CHODLQ9H9P2 273 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 UBQLN4Q9NRR5 601 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 FLRT3Q9NZU0 649 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 IFT52Q9Y366 437 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
SHKBP1-218ENST00000598907 NPIPA5A0A0B4J1W7 369 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 A0A1W2PQD3 144 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 AQP12BA6NM10 295 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 NPIPA7E9PJI5 369 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 ICOSLGO75144 302 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 GMNNO75496 209 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 SERPINB7O75635 380 aa12.4□□□□□ -0.42
SHKBP1-218ENST00000598907 OXSR1O95747 527 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms