RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ELOA3DA6NLF2 546 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 CHP2O43745 196 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 PNMTP11086 282 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ZNF23P17027 643 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 DPP4P27487 766 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 DNAJA1P31689 397 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC1A3P43003 542 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 HTR3AP46098 478 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 POLR2HP52434 150 aaKnown RBP10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 IST1P53990 364 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 DSCR4P56555 118 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC34A1Q06495 639 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 DGCR6Q14129 220 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 CDSNQ15517 529 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 TRIP10Q15642 601 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ELOA3BQ3SY89 546 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 IQCCQ4KMZ1 466 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 XKRXQ6PP77 449 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 LILRA2Q8N149 483 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ICA1LQ8NDH6 482 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ELOA3Q8NG57 546 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 OR52J3Q8NH60 311 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 SLC38A4Q969I6 547 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ZBTB8AQ96BR9 441 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 NTNG2Q96CW9 530 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 GNRHR2Q96P88 292 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 EPYCQ99645 322 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 FOXC2Q99958 501 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 TTTY12Q9BZ98 90 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ANKRD19PQ9H560 264 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 KRCC1Q9NPI7 259 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 ACER3Q9NUN7 267 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 MED17Q9NVC6 651 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 HRH3Q9Y5N1 445 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 LYVE1Q9Y5Y7 322 aa10.9□□□□□ -0.66
SHKBP1-213ENST00000597325 CNTRLQ7Z7A1 2325 aa10.9□□□□□ -0.67
SHKBP1-213ENST00000597325 PINLYPA6NC86 204 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 SAC3D1A6NKF1 404 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 FFAR1O14842 300 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 PRSS23O95084 383 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 PRKCAP17252 672 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 HK1P19367 917 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 FPR1P21462 350 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 TCEA1P23193 301 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 CXCR1P25024 350 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 TACR3P29371 465 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 SRD5A2P31213 254 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 EIF1P41567 113 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 TDGF1P3P51864 188 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 MERTKQ12866 999 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 FOXF1Q12946 379 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 TOMM34Q15785 309 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 PLPPR5Q32ZL2 321 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 DCST1Q5T197 706 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 RAET1LQ5VY80 246 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 FBXW10Q5XX13 1052 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF324BQ6AW86 544 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 HMBOX1Q6NT76 420 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 POMZP3Q6PJE2 187 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ARSKQ6UWY0 536 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF730Q6ZMV8 503 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 RRM2BQ7LG56 351 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ZDHHC13Q8IUH4 622 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 SVOPLQ8N434 492 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 OR5K1Q8NHB7 308 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 OR14L1PQ8NHC6 308 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 C3orf49Q96BT1 292 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 MPP4Q96JB8 637 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 MRGPRX4Q96LA9 322 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 DHRS1Q96LJ7 313 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ALPK1Q96QP1 1244 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ENKD1Q9H0I2 346 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF703Q9H7S9 590 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 C12orf10Q9HB07 376 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 STOML1Q9UBI4 398 aa10.89□□□□□ -0.67
SHKBP1-213ENST00000597325 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 FAM166BA8MTA8 275 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 TRAPPC6AO75865 159 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 CCNB2O95067 398 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 ZNF17P17021 662 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 AGAP20933 346 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 GCKP35557 465 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 IFNGR2P38484 337 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 RFC3P40938 356 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 APOBEC1P41238 236 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 RBM34P42696 430 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 PPIAP62937 165 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 ADORA2A-AS1P86434 159 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 FOXO1Q12778 655 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 SNCBQ16143 134 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 INAQ16352 499 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 EXOC3L2Q2M3D2 409 aa10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 SHQ1Q6PI26 577 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 TTC33Q6PID6 262 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 TSPYL5Q86VY4 417 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-213ENST00000597325 HIPK1Q86Z02 1210 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms