RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, human

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF43-208	ENST00000596899	RBM4B	Q9BQ04	359 aa	Known RBP	11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	C7orf69	Q9H7B7	122 aa		11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZNF665	Q9H7R5	613 aa		11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMBIM4	Q9HC24	238 aa		11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC7A10	Q9NS82	523 aa		11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	CPSF2	Q9P2I0	782 aa	Known RBP	11.19	□□□□□ -0.62
ZNF43-208	ENST00000596899	SULT2B1	O00204	365 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	NKX2-2	O95096	273 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	HPX	P02790	462 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	CECR9	P0C854	216 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC18A1	P54219	525 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SUMO3	P55854	103 aa	Predicted RBP	11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	CSNK2A1	P68400	391 aa	Predicted RBP	11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	RAE1	P78406	368 aa	Known RBP	11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	PRSS53	Q2L4Q9	553 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	TUSC1	Q2TAM9	212 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	GGTA1P	Q4G0N0	100 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC9B1	Q4ZJI4	515 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	AGBL2	Q5U5Z8	902 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	RHOU	Q7L0Q8	258 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	MTDH	Q86UE4	582 aa	Known RBP	11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC22A9	Q8IVM8	553 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	HOMEZ	Q8IX15	550 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMEM151A	Q8N4L1	468 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	OR4F6	Q8NGB9	312 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	C16orf78	Q8WTQ4	265 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	RDH5	Q92781	318 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZNF524	Q96C55	264 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	ANKRD27	Q96NW4	1050 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	CITED1	Q99966	193 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SHCBP1L	Q9BZQ2	653 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	GLIPR2	Q9H4G4	154 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	SEC61A2	Q9H9S3	476 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMEM216	Q9P0N5	145 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	VPS29	Q9UBQ0	182 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	OPN4	Q9UHM6	478 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	CARD8	Q9Y2G2	431 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	MMP24	Q9Y5R2	645 aa		11.18	□□□□□ -0.62
ZNF43-208	ENST00000596899	ARHGAP32	A7KAX9	2087 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	TM9SF1	O15321	606 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	PLIN3	O60664	434 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	KCNK2	O95069	426 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	ATP5F1	P24539	256 aa	Predicted RBP	11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	MPG	P29372	298 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	NTS	P30990	170 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	PCGF2	P35227	344 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	HGFAC	Q04756	655 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	NDUFAF6	Q330K2	333 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	VPS26B	Q4G0F5	336 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	TSPO2	Q5TGU0	170 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	ANKRD16	Q6P6B7	361 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMPPE	Q6ZT21	453 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	SPATC1	Q76KD6	591 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	MTERF4	Q7Z6M4	381 aa	Known RBP	11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	C4orf33	Q8N1A6	199 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	KIR3DL3	Q8N743	410 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	GOLGA6L1	Q8N7Z2	621 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	OR6Y1	Q8NGX8	325 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	CDC26	Q8NHZ8	85 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	PIGX	Q8TBF5	258 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	GPR119	Q8TDV5	335 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	YIPF5	Q969M3	257 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	NSUN5	Q96P11	429 aa	Known RBP	11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	GPA33	Q99795	319 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	C1QTNF3	Q9BXJ4	246 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	EBPL	Q9BY08	206 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	QRSL1	Q9H0R6	528 aa	Known RBP	11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	OBP2B	Q9NPH6	170 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	SNX6	Q9UNH7	406 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899	STK38L	Q9Y2H1	464 aa		11.17	□□□□□ -0.62
ZNF43-208	ENST00000596899		H3BQF6	201 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	TYROBP	O43914	113 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	PRB2	P02812	416 aa	Predicted RBP	11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	PROC	P04070	461 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	SBK3	P0C264	359 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	ACP2	P11117	423 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	PRPS2	P11908	318 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	TCN1	P20061	433 aa	Predicted RBP	11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	DDC	P20711	480 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	MAP3K8	P41279	467 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC16A1	P53985	500 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	PRKAA2	P54646	552 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMEM33	P57088	247 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	QPRT	Q15274	297 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	SLC25A53	Q5H9E4	307 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	VAX1	Q5SQQ9	334 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	CCNJ	Q5T5M9	372 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	SAXO2	Q658L1	398 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZYG11A	Q6WRX3	759 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	TMCO5A	Q8N6Q1	288 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	RFWD2	Q8NHY2	731 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	HOXB13	Q92826	284 aa	Predicted RBP	11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	ARL8A	Q96BM9	186 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	TLCD1	Q96CP7	247 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZHX1-C8orf76	Q96EF9	292 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	DNAJA3	Q96EY1	480 aa		11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	ZNF48	Q96MX3	618 aa	Predicted RBP	11.16	□□□□□ -0.62
ZNF43-208	ENST00000596899	AMDHD1	Q96NU7	426 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms