RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 LSRQ86X29 649 aaPredicted RBP17.35■□□□□ 0.37
PNKP-207ENST00000596014 OR10D3Q8NH80 312 aa17.35■□□□□ 0.37
PNKP-207ENST00000596014 ZNF845Q96IR2 970 aaPredicted RBP17.35■□□□□ 0.37
PNKP-207ENST00000596014 UCN2Q96RP3 112 aa17.35■□□□□ 0.37
PNKP-207ENST00000596014 RPS6KB2Q9UBS0 482 aa17.35■□□□□ 0.37
PNKP-207ENST00000596014 MAGEL2Q9UJ55 1249 aa17.35■□□□□ 0.37
PNKP-207ENST00000596014 DOPEY1Q5JWR5 2465 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 TMEM72A0PK05 275 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 ZNF208O43345 1280 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 ACADSP16219 412 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 SLC7A1P30825 629 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 OR1E2P47887 323 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 PER3P56645 1201 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 CARD18P57730 90 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 NUP107P57740 925 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 HBMQ6B0K9 141 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 ZFP1Q6P2D0 407 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 ATG4DQ86TL0 474 aaPredicted RBP17.34■□□□□ 0.37
PNKP-207ENST00000596014 DNAJA4Q8WW22 397 aaPredicted RBP17.34■□□□□ 0.37
PNKP-207ENST00000596014 OSTF1Q92882 214 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 OR11A1Q9GZK7 315 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 DCAF13Q9NV06 445 aaKnown RBP17.34■□□□□ 0.37
PNKP-207ENST00000596014 PAQR5Q9NXK6 330 aaPredicted RBP17.34■□□□□ 0.37
PNKP-207ENST00000596014 CLCF1Q9UBD9 225 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 RPS6KA6Q9UK32 745 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 LRRC42Q9Y546 428 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 SNX13Q9Y5W8 968 aa17.34■□□□□ 0.37
PNKP-207ENST00000596014 A0A1W2PNR3 127 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 ARPC2O15144 300 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 CXCL13O43927 109 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 CLK1P49759 484 aaKnown RBP17.33■□□□□ 0.37
PNKP-207ENST00000596014 ADORA2A-AS1P86434 159 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 BNIP2Q12982 314 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 ENTPD8Q5MY95 495 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 PDSS1Q5T2R2 415 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 ULK3Q6PHR2 472 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 RSRC1Q96IZ7 334 aaKnown RBP17.33■□□□□ 0.37
PNKP-207ENST00000596014 OR5B2Q96R09 309 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 COQ10BQ9H8M1 238 aa17.33■□□□□ 0.37
PNKP-207ENST00000596014 INTS1Q8N201 2190 aaKnown RBP17.33■□□□□ 0.36
PNKP-207ENST00000596014 A0A0B4J2E0 115 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 A0A1B0GX12 115 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 WIPF3A6NGB9 483 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ZG16O60844 167 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TOXO94900 526 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TGM6O95932 706 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 LDLRP01130 860 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TFPIP10646 304 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TIMP3P35625 211 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ALG10BQ5I7T1 473 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TSPYL5Q86VY4 417 aaPredicted RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 RND1Q92730 232 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 WNT2BQ93097 391 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 HSH2DQ96JZ2 352 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ARL5BQ96KC2 179 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 C12orf10Q9HB07 376 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ZC3H12DA2A288 527 aaKnown RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 MBD3L4A6NDZ8 208 aaPredicted RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 MBD3L3A6NE82 208 aaPredicted RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 MBD3L5A6NJ08 208 aaPredicted RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 SLC22A20A6NK97 555 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 CPSF4LA6NMK7 179 aaKnown RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 CDH12P55289 794 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TRAP1Q12931 704 aaKnown RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 TRIM25Q14258 630 aaKnown RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 PON3Q15166 354 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ZNF613Q6PF04 617 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 FKBP9P1Q75LS8 142 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 MBD3L2Q8NHZ7 208 aaPredicted RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 FNDC9Q8TBE3 224 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ADAMTS16Q8TE57 1224 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 SLC38A4Q969I6 547 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 DDIT4LQ96D03 193 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 SLC47A1Q96FL8 570 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 NSMCE2Q96MF7 247 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 TIGARQ9NQ88 270 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ACTR3BQ9P1U1 418 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 SAMD4AQ9UPU9 718 aaKnown RBP17.32■□□□□ 0.36
PNKP-207ENST00000596014 HDGFL3Q9Y3E1 203 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ZNF175Q9Y473 711 aa17.32■□□□□ 0.36
PNKP-207ENST00000596014 ELOA3DA6NLF2 546 aaPredicted RBP17.31■□□□□ 0.36
PNKP-207ENST00000596014 RPSAP08865 295 aaKnown RBP17.31■□□□□ 0.36
PNKP-207ENST00000596014 RNF224P0DH78 156 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 PNMTP11086 282 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 CEACAM8P31997 349 aaPredicted RBP17.31■□□□□ 0.36
PNKP-207ENST00000596014 DIO1P49895 249 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 MYBPHQ13203 477 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 ELOA3BQ3SY89 546 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 IFI44LQ53G44 452 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 TMPPEQ6ZT21 453 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 ELOA3Q8NG57 546 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 TM9SF2Q99805 663 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 SRXN1Q9BYN0 137 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 SELENONQ9NZV5 590 aa17.31■□□□□ 0.36
PNKP-207ENST00000596014 A0A0G2JNJ9 132 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 A8MVM7 634 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 SULT2B1O00204 365 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 CASQ2O14958 399 aaPredicted RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 PRKD3O94806 890 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 252.7 ms