RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CRYBA2P53672 197 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 SEC24CP53992 1094 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 CSNK2A1P68400 391 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 DMTNQ08495 405 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 BNIP2Q12982 314 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 DAZAP2Q15038 168 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 CYP51A1Q16850 503 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 COQ5Q5HYK3 327 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 WBP2NLQ6ICG8 309 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 NANOGP8Q6NSW7 305 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 TFAP2EQ6VUC0 442 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF550Q7Z398 422 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 ATG4DQ86TL0 474 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 TMEM200AQ86VY9 491 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC43A2Q8N370 569 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 C11orf65Q8NCR3 313 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 HIPK4Q8NE63 616 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 OR10A6Q8NH74 314 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 NRGNQ92686 78 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC35B4Q969S0 331 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 LRRC58Q96CX6 371 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 REXO5Q96IC2 774 aaKnown RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 WFIKKN1Q96NZ8 548 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 NANOGQ9H9S0 305 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 GP6Q9HCN6 339 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 MRGBPQ9NV56 204 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 ELOVL5Q9NYP7 299 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 USP22Q9UPT9 525 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 HDGFL3Q9Y3E1 203 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 CAPN7Q9Y6W3 813 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF469Q96JG9 3925 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 LOC100653049A0A140TA62 436 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF716A6NP11 495 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 BBIP1A8MTZ0 92 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 MRASO14807 208 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC22A2O15244 555 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 SIAH2O43255 324 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 DNPH1O43598 174 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 TPST2O60704 377 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 NPIPB7O75200 414 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 KRT34O76011 436 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 OPN1SWP03999 348 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 YES1P07947 543 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 FKBP2P26885 142 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ADSLP30566 484 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 NTF4P34130 210 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 GYS2P54840 703 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 H3F3AP84243 136 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 RBBP4Q09028 425 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 RASGEF1BQ0VAM2 473 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 EXOC3L2Q2M3D2 409 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 TMEM201Q5SNT2 666 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 STAC2Q6ZMT1 411 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 MTDHQ86UE4 582 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 CALHM3Q86XJ0 350 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 KRT73Q86Y46 540 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 TREML1Q86YW5 311 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 CCDC103Q8IW40 242 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 GABRG1Q8N1C3 465 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 POU5F2Q8N7G0 328 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 GPR32P1Q8NGA4 272 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF775Q96BV0 537 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 DDIT4LQ96D03 193 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 DACH2Q96NX9 599 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 PRR14Q9BWN1 585 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ARMC7Q9H6L4 198 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 CACYBPQ9HB71 228 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 KLHL28Q9NXS3 571 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 TMEM181Q9P2C4 612 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 KLHL9Q9P2J3 617 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 PRDM4Q9UKN5 801 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ANGPT4Q9Y264 503 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 TRAPPC4Q9Y296 219 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 DSCAMO60469 2012 aa9.76□□□□□ -0.85
SHKBP1-206ENST00000595523 ARID1AO14497 2285 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 IGKV3D-15A0A087WSY6 115 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 A0A1W2PPR1 153 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 LIPT2A6NK58 231 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF724A8MTY0 619 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 C16orf97H3BN30 126 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 DRD4P21917 467 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 CXCR1P25024 350 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 LSP1P33241 339 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 PCGF2P35227 344 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 KCNJ5P48544 419 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 MAP2K6P52564 334 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 OR2B6P58173 313 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 COPZ1P61923 177 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 EGR4Q05215 589 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 CYLC2Q14093 348 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 MAPRE2Q15555 327 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 DUSP7Q16829 419 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 VMACQ2NL98 169 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 C6orf89Q6UWU4 347 aa9.75□□□□□ -0.85
SHKBP1-206ENST00000595523 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms