RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 LACC1Q8IV20 430 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 ALDH16A1Q8IZ83 802 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 PARP8Q8N3A8 854 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 SMYD1Q8NB12 490 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 OR7G2Q8NG99 324 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 OR10G2Q8NGC3 310 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 XAGE5Q8WWM1 108 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 HOXB13Q92826 284 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 COL21A1Q96P44 957 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 TRNT1Q96Q11 434 aaKnown RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 RASL10BQ96S79 203 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 FUZQ9BT04 418 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 PINK1Q9BXM7 581 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 JKAMPQ9P055 326 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 MYOTQ9UBF9 498 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 PPIEQ9UNP9 301 aaKnown RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 C19orf53Q9UNZ5 99 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 POFUT2Q9Y2G5 429 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
SCAF1-202ENST00000595242 MED12Q93074 2177 aa11.6□□□□□ -0.55
SCAF1-202ENST00000595242 WWP2O00308 870 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 PLOD3O60568 738 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 GADD45GO95257 159 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 OXSR1O95747 527 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 GPR75O95800 540 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CBLP22681 906 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ELK4P28324 431 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 TTKP33981 857 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 GPR143P51810 404 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CDH12P55289 794 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CDH15P55291 814 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 SKP1P63208 163 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 IGLV3-21P80748 117 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 TEKQ02763 1124 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 NPRL3Q12980 569 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ACKR1Q16570 336 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 EXOC3L2Q2M3D2 409 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CTU2Q2VPK5 515 aaKnown RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CNPY1Q3B7I2 92 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF770Q6IQ21 691 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ZCCHC12Q6PEW1 402 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 DHRS4L2Q6PKH6 230 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 FAM111BQ6SJ93 734 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 SZRD1Q7Z422 152 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 TSPYL5Q86VY4 417 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ATG16L2Q8NAA4 619 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 CTHRC1Q96CG8 243 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 DGCR14Q96DF8 476 aaKnown RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 HRASLS5Q96KN8 279 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 APOL4Q9BPW4 351 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 GSX2Q9BZM3 304 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 UBTD1Q9HAC8 227 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 PNO1Q9NRX1 252 aaKnown RBP11.59□□□□□ -0.55
SCAF1-202ENST00000595242 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
SCAF1-202ENST00000595242 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 J3KTA2 159 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 FFAR1O14842 300 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 FGF17O60258 216 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 CCNB2O95067 398 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 LGI1O95970 557 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 P04436 131 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 GUSBP08236 651 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 CCL3P10147 92 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 CTSSP25774 331 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 OPRM1P35372 400 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 POLR2IP36954 125 aaKnown RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 MAP3K8P41279 467 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 PTH2RP49190 550 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 PRKAG1P54619 331 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 TPD52P55327 224 aaPredicted RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 SMIM11AP58511 58 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 MGAT2Q10469 447 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 PRICKLE4Q2TBC4 344 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 SLC44A2Q8IWA5 706 aaPredicted RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 TMEM52Q8NDY8 209 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 OR4D11Q8NGI4 311 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 NEIL3Q8TAT5 605 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 KAT2AQ92830 837 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 ANKRD9Q96BM1 317 aaPredicted RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 HSPBAP1Q96EW2 488 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 C16orf58Q96GQ5 468 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 SGCZQ96LD1 299 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 FEVQ99581 238 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 ARHGDIGQ99819 225 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 TUBA1CQ9BQE3 449 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 SLC6A15Q9H2J7 730 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 PIGUQ9H490 435 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 RIBC2Q9H4K1 309 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
SCAF1-202ENST00000595242 MAT2BQ9NZL9 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms