RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TMEM38AQ9H6F2 299 aa15.77■□□□□ 0.12
SHKBP1-204ENST00000594862 EVA1AQ9H8M9 152 aa15.77■□□□□ 0.12
SHKBP1-204ENST00000594862 NGBQ9NPG2 151 aa15.77■□□□□ 0.12
SHKBP1-204ENST00000594862 SLC52A3Q9NQ40 469 aa15.77■□□□□ 0.12
SHKBP1-204ENST00000594862 NDUFAF1Q9Y375 327 aa15.77■□□□□ 0.12
SHKBP1-204ENST00000594862 A0A0G2JND7 137 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 PRORSD1PA6NEY8 169 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 DEFB108AA8MXU0 73 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 PGM3O95394 542 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 GPX2P18283 190 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 SLC16A1P53985 500 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 PAGE3Q5JUK9 113 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 NUFIP2Q7Z417 695 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 MSRB3Q8IXL7 192 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 DPP10Q8N608 796 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 KISS1RQ969F8 398 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 PIK3IP1Q96FE7 263 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 ARL5BQ96KC2 179 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF607Q96SK3 696 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 POTEKPQ9BYX7 375 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF385DQ9H6B1 395 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 CCM2LQ9NUG4 571 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 RLIMQ9NVW2 624 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 VAPAQ9P0L0 249 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 C6orf203Q9P0P8 240 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 PLEKHA6Q9Y2H5 1048 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 SPG11Q96JI7 2443 aa15.76■□□□□ 0.11
SHKBP1-204ENST00000594862 ITPR3Q14573 2671 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 GCM2O75603 506 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 GPIP06744 558 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 NUDT7P0C024 238 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 FPR1P21462 350 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 SLC6A2P23975 617 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 IDUAP35475 653 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ACAA2P42765 397 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 OR2B6P58173 313 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 CDK6Q00534 326 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ITGADQ13349 1161 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 SFRP5Q5T4F7 317 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 DHDDSQ86SQ9 333 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 CXorf67Q86X51 503 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF100Q8IYN0 542 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 CADM2Q8N3J6 435 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 MAL2Q969L2 176 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ZC3HAV1LQ96H79 300 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 OR11A1Q9GZK7 315 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 MED4Q9NPJ6 270 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ING1Q9UK53 422 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 ANGPT4Q9Y264 503 aa15.75■□□□□ 0.11
SHKBP1-204ENST00000594862 NF1P21359 2839 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 TMEM72A0PK05 275 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF716A6NP11 495 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 A8MVM7 634 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 SERPINB7O75635 380 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 ATE1O95260 518 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 GKN3PP0CG01 181 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 CCNA2P20248 432 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 H3F3AP84243 136 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 RBBP4Q09028 425 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 ANKRD34AQ69YU3 496 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 PAQR6Q6TCH4 344 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 C20orf204Q6ZNR8 217 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 SLC30A8Q8IWU4 369 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 NFKBIDQ8NI38 313 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 HSD17B8Q92506 261 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 APH1AQ96BI3 265 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 THOC1Q96FV9 657 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF300Q96RE9 604 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 TAPBPLQ9BX59 468 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 LIME1Q9H400 295 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 PIF1Q9H611 641 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 C12orf10Q9HB07 376 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 BEX4Q9NWD9 120 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 PARPBPQ9NWS1 579 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 SLAMF8Q9P0V8 285 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 SLC13A4Q9UKG4 626 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 SLC9A8Q9Y2E8 581 aa15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 NOSIPQ9Y314 301 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-204ENST00000594862 ADAP00813 363 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 SCARB2Q14108 478 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 DEFB113Q30KQ7 82 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 DHRS4L2Q6PKH6 230 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 C5orf46Q6UWT4 87 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 DLEU7Q6UYE1 221 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 SERPINA11Q86U17 422 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 CLIP4Q8N3C7 705 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 C11orf65Q8NCR3 313 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 HIPK4Q8NE63 616 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 PIGTQ969N2 578 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 S100PBPQ96BU1 408 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 CPPED1Q9BRF8 314 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 TMEM120AQ9BXJ8 343 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 RPS6KB2Q9UBS0 482 aa15.73■□□□□ 0.11
SHKBP1-204ENST00000594862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 MRPL33O75394 65 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 THBDP07204 575 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 NCALDP61601 193 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 NFYCQ13952 458 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 MAPRE2Q15555 327 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms