RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ICAM5Q9UMF0 924 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 YARS2Q9Y2Z4 477 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 DCDC2BA2VCK2 349 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 AIREO43918 545 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 EIF4E2O60573 245 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 LIPCP11150 499 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 OMPP47874 163 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 MLF1P58340 268 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 IRF3Q14653 427 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 ZNF791Q3KP31 576 aaPredicted RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 ULK3Q6PHR2 472 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 MBOAT2Q6ZWT7 520 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 PRICKLE2Q7Z3G6 844 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 BCDIN3DQ7Z5W3 292 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 ARMC10Q8N2F6 343 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 SIRT6Q8N6T7 355 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 TCEANCQ8N8B7 351 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 PIGXQ8TBF5 258 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 TMEM239Q8WW34 195 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 TRUB1Q8WWH5 349 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 ZNF524Q96C55 264 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 ZHX1-C8orf76Q96EF9 292 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 TVP23BQ9NYZ1 205 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 CNOT2Q9NZN8 540 aaKnown RBP12.05□□□□□ -0.48
VRK3-205ENST00000593919 KLRF1Q9NZS2 232 aa12.05□□□□□ -0.48
VRK3-205ENST00000593919 FRYQ5TBA9 3013 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 SERPINA7P05543 415 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 LIFP15018 202 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 ENDOUP21128 410 aaKnown RBP12.04□□□□□ -0.48
VRK3-205ENST00000593919 MST1P26927 711 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 IFNGR2P38484 337 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 SERPINB10P48595 397 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 SSR4P51571 173 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 SNRPGP62308 76 aaKnown RBP12.04□□□□□ -0.48
VRK3-205ENST00000593919 MED22Q15528 200 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 ARMCX4Q5H9R4 360 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 IL20RBQ6UXL0 311 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 SLC46A3Q7Z3Q1 461 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 PFN4Q8NHR9 129 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 C9orf43Q8TAL5 461 aaPredicted RBP12.04□□□□□ -0.48
VRK3-205ENST00000593919 BRIX1Q8TDN6 353 aaKnown RBP12.04□□□□□ -0.48
VRK3-205ENST00000593919 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 ASB15Q8WXK1 588 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 ABTB1Q969K4 478 aaPredicted RBP12.04□□□□□ -0.48
VRK3-205ENST00000593919 C3orf49Q96BT1 292 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 CRELD1Q96HD1 420 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
VRK3-205ENST00000593919 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 B4DXG7 233 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 KPNA4O00629 521 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 NUDT14O95848 222 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ITPKBP27987 946 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 IDUAP35475 653 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 PTGDSP41222 190 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GPR4P46093 362 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 SLC6A8P48029 635 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GAS1P54826 345 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 RTP5Q14D33 572 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 B3GNTL1Q67FW5 361 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 OR5M10Q6IEU7 315 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 H3F3CQ6NXT2 135 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 OPN5Q6U736 354 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 CD300LDQ6UXZ3 194 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ZNF367Q7RTV3 350 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 VASH2Q86V25 355 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 MISPQ8IVT2 679 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 OR5W2Q8NH69 310 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ZNF563Q8TA94 476 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 DNAJA4Q8WW22 397 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 OR5M11Q96RB7 305 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 DCSTAMPQ9H295 470 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 METTL7AQ9H8H3 244 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 SLC25A19Q9HC21 320 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 CHCHD2Q9Y6H1 151 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 FREM3P0C091 2139 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 LOC100506127A0A0U1RQW1 187 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GNB5O14775 395 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GRK5P34947 590 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 SLC15A1P46059 708 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 P2RX1P51575 399 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ALDH6A1Q02252 535 aaKnown RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 COX10Q12887 443 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 CBFBQ13951 182 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GINS1Q14691 196 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 ZNF846Q147U1 533 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 TOMM34Q15785 309 aaPredicted RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 LINC00114Q6XXX2 140 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 IGFN1Q86VF2 1251 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 RNF113BQ8IZP6 322 aaKnown RBP12.03□□□□□ -0.48
VRK3-205ENST00000593919 TMEM156Q8N614 296 aa12.03□□□□□ -0.48
VRK3-205ENST00000593919 GNPDA2Q8TDQ7 276 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms