RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 CAPN7Q9Y6W3 813 aa12.93□□□□□ -0.34
DDX39A-217ENST00000592391 LOC100653049A0A140TA62 436 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 ZC3H12DA2A288 527 aaKnown RBP12.92□□□□□ -0.34
DDX39A-217ENST00000592391 C16orf97H3BN30 126 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 FXYD1O00168 92 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 MRASO14807 208 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 TPST1O60507 370 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 KRT34O76011 436 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 TACC2O95359 2948 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 CXCR1P25024 350 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 CCKARP32238 428 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 NANOGP8Q6NSW7 305 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 BEND4Q6ZU67 534 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 NUFIP2Q7Z417 695 aaKnown RBP12.92□□□□□ -0.34
DDX39A-217ENST00000592391 COMTD1Q86VU5 262 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 ARMC8Q8IUR7 673 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 SLC30A8Q8IWU4 369 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 OR8J3Q8NGG0 315 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 OR10A6Q8NH74 314 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 DNAJA3Q96EY1 480 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 GPATCH1Q9BRR8 931 aaKnown RBP12.92□□□□□ -0.34
DDX39A-217ENST00000592391 NANOGQ9H9S0 305 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 FANCFQ9NPI8 374 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 ARMCX1Q9P291 453 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 TESMINQ9Y4I5 508 aa12.92□□□□□ -0.34
DDX39A-217ENST00000592391 ZNF724A8MTY0 619 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 EIF1BO60739 113 aaKnown RBP12.91□□□□□ -0.34
DDX39A-217ENST00000592391 CCDC22O60826 627 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 MFN2O95140 757 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 GOSR1O95249 250 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 IMPDH2P12268 514 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 GZMMP51124 257 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 SEC24CP53992 1094 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 OR2B6P58173 313 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 SLC35A1P78382 337 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 HOXC5Q00444 222 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 PDK3Q15120 406 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 GLIPR1L2Q4G1C9 344 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 RABL3Q5HYI8 236 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 TFAP2EQ6VUC0 442 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 SPATA21Q7Z572 469 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 ATG4DQ86TL0 474 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-217ENST00000592391 LSMEM1Q8N8F7 131 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 PCYOX1LQ8NBM8 494 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 PIGXQ8TBF5 258 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 POLDIP3Q9BY77 421 aaKnown RBP12.91□□□□□ -0.34
DDX39A-217ENST00000592391 POTEKPQ9BYX7 375 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 CLEC4MQ9H2X3 399 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-217ENST00000592391 EVA1AQ9H8M9 152 aa12.91□□□□□ -0.34
DDX39A-217ENST00000592391 PDZD2O15018 2839 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 IGKV3D-15A0A087WSY6 115 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 A8MVM7 634 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 TMEM229AB2RXF0 380 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 M0QX08 132 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 CASKO14936 926 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 FPR1P21462 350 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 PCGF2P35227 344 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 IDUAP35475 653 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 H3F3AP84243 136 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 DMTNQ08495 405 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 VMACQ2NL98 169 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 INTS11Q5TA45 600 aaKnown RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 STAC2Q6ZMT1 411 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 PATL1Q86TB9 770 aaKnown RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 LSRQ86X29 649 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 SMYD1Q8NB12 490 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 RP9Q8TA86 221 aaKnown RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 ZNF300Q96RE9 604 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 ELAC2Q9BQ52 826 aaKnown RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 ECSITQ9BQ95 431 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 MED18Q9BUE0 208 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 GID8Q9NWU2 228 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 KLHL28Q9NXS3 571 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 EMC3Q9P0I2 261 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 RPS6KB2Q9UBS0 482 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 TESQ9UGI8 421 aaKnown RBP12.9□□□□□ -0.34
DDX39A-217ENST00000592391 SLC13A4Q9UKG4 626 aa12.9□□□□□ -0.34
DDX39A-217ENST00000592391 POLQO75417 2590 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 LIPT2A6NK58 231 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 ZNF716A6NP11 495 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 NPIPB7O75200 414 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 GPIP06744 558 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 PSMB1P20618 241 aaKnown RBP12.89□□□□□ -0.35
DDX39A-217ENST00000592391 HTR2AP28223 471 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 LSP1P33241 339 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 OR3A2P47893 321 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 SLC16A1P53985 500 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 RGS8P57771 180 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-217ENST00000592391 NCALDP61601 193 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 BNIP2Q12982 314 aa12.89□□□□□ -0.35
DDX39A-217ENST00000592391 CEACAM7Q14002 265 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms