RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DMTNQ08495 405 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 ZSWIM7Q19AV6 140 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 ATG4DQ86TL0 474 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-205ENST00000592333 DEPDC4Q8N2C3 294 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 NEUROG1Q92886 237 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 BOD1Q96IK1 185 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 ADAD1Q96M93 576 aaKnown RBP16.62■□□□□ 0.25
CCDC43-205ENST00000592333 HS6ST2Q96MM7 605 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 AMBRA1Q9C0C7 1298 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 SLC38A1Q9H2H9 487 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 AIG1Q9NVV5 245 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 SLC25A15Q9Y619 301 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 CADP27708 2225 aa16.62■□□□□ 0.25
CCDC43-205ENST00000592333 TMED7-TICAM2A0A0A6YYA0 188 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 CCT8L1PA6NM43 557 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 TRPC5OSA6NMA1 111 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 RNF223E7ERA6 249 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 SLCO1B7G3V0H7 640 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 PDLIM1O00151 329 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 RAMP1O60894 148 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 KRT75O95678 551 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 IGHV4-39P01824 125 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 TP53P04637 393 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-205ENST00000592333 DBIP07108 87 aaKnown RBP16.61■□□□□ 0.25
CCDC43-205ENST00000592333 BGNP21810 368 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 TTKP33981 857 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 CDKN1AP38936 164 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 CDH11P55287 796 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 TGFBR3Q03167 851 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 PLAURQ03405 335 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 PAQR6Q6TCH4 344 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 OLIG3Q7RTU3 272 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 RNF130Q86XS8 419 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 OR52E6Q96RD3 313 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 DHRS9Q9BPW9 319 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 SF3B5Q9BWJ5 86 aaKnown RBP16.61■□□□□ 0.25
CCDC43-205ENST00000592333 NPAP1Q9NZP6 1156 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 CALML5Q9NZT1 146 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 OSGIN1Q9UJX0 560 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 TMED7Q9Y3B3 224 aa16.61■□□□□ 0.25
CCDC43-205ENST00000592333 CFAP73A6NFT4 308 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 HDAC3O15379 428 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 ADAM11O75078 769 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 BCAS1O75363 584 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-205ENST00000592333 RAD51DO75771 328 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 IL6P05231 212 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 IL7RP16871 459 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 OR2B6P58173 313 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 BST1Q10588 318 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 GABRA6Q16445 453 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 ZNF544Q6NX49 715 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 PEX5LQ8IYB4 626 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 WDR60Q8WVS4 1066 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 CNOT9Q92600 299 aaKnown RBP16.6■□□□□ 0.25
CCDC43-205ENST00000592333 TMEM45BQ96B21 275 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 ZBTB18Q99592 522 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 ADAM19Q9H013 955 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 CBLN4Q9NTU7 201 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 THAP1Q9NVV9 213 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 THUMPD1Q9NXG2 353 aaKnown RBP16.6■□□□□ 0.25
CCDC43-205ENST00000592333 AMDHD2Q9Y303 409 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 FLVCR1Q9Y5Y0 555 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 GPR45Q9Y5Y3 372 aa16.6■□□□□ 0.25
CCDC43-205ENST00000592333 FAM234BA2RU67 622 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 SDHDO14521 159 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 CD5LO43866 347 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 ALDOCP09972 364 aaKnown RBP16.59■□□□□ 0.25
CCDC43-205ENST00000592333 BMP4P12644 408 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 CD40P25942 277 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 TACR3P29371 465 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 NTF4P34130 210 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 ACVR1BP36896 505 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 SLC18A1P54219 525 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 UFM1P61960 85 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 FAPQ12884 760 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 EPS8Q12929 822 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 MPP2Q14168 576 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 SLC17A1Q14916 467 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 SYPL1Q16563 259 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 ZNF621Q6ZSS3 439 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 ANKFN1Q8N957 763 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 TEX37Q96LM6 180 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 RHNO1Q9BSD3 238 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 PARD6BQ9BYG5 372 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 OR11A1Q9GZK7 315 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 KCNK9Q9NPC2 374 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 PNPOQ9NVS9 261 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 B3GALT5Q9Y2C3 310 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 DNHD1Q96M86 4753 aa16.59■□□□□ 0.25
CCDC43-205ENST00000592333 CLDN24A6NM45 220 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 KIAA1324LA8MWY0 1029 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-205ENST00000592333 GPIP06744 558 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 CHRM4P08173 479 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 ITGA5P08648 1049 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 ZCCHC18P0CG32 403 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 NR2F1P10589 423 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 IDO1P14902 403 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 CEP85LQ5SZL2 805 aa16.58■□□□□ 0.24
CCDC43-205ENST00000592333 MRPL2Q5T653 305 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms