RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MTDHQ86UE4 582 aaKnown RBP16.19■□□□□ 0.18
DDX39A-212ENST00000590260 TMEM200AQ86VY9 491 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 SNX32Q86XE0 403 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 CCDC103Q8IW40 242 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 CADM2Q8N3J6 435 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 DACH2Q96NX9 599 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 GP6Q9HCN6 339 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 KLHL28Q9NXS3 571 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ARMCX1Q9P291 453 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ZNF232Q9UNY5 417 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 CORO2BQ9UQ03 480 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 MPDZO75970 2070 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 DEFB108AA8MXU0 73 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 NPIPB7O75200 414 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 HRGP04196 525 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 LOXP28300 417 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-212ENST00000590260 SEC24CP53992 1094 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 EGR4Q05215 589 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 ZSWIM7Q19AV6 140 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 CALHM3Q86XJ0 350 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 GABRG1Q8N1C3 465 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 SLC43A2Q8N370 569 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 HIPK4Q8NE63 616 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 GPR32P1Q8NGA4 272 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 SLC35B4Q969S0 331 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 REXO5Q96IC2 774 aaKnown RBP16.18■□□□□ 0.18
DDX39A-212ENST00000590260 PRSS50Q9UI38 385 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 TRAPPC4Q9Y296 219 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 SPIN1Q9Y657 262 aaPredicted RBP16.18■□□□□ 0.18
DDX39A-212ENST00000590260 FREM1Q5H8C1 2179 aa16.18■□□□□ 0.18
DDX39A-212ENST00000590260 IGKV3D-15A0A087WSY6 115 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 LOC100653049A0A140TA62 436 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 KRT34O76011 436 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 OPN1SWP03999 348 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 SLC6A2P23975 617 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 GYS2P54840 703 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 CSNK2A1P68400 391 aaPredicted RBP16.17■□□□□ 0.18
DDX39A-212ENST00000590260 TSC22D1Q15714 1073 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 COQ5Q5HYK3 327 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 TMEM201Q5SNT2 666 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 GTF2IRD2BQ6EKJ0 949 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 CDH24Q86UP0 819 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 GTF2IRD2Q86UP8 949 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 CDC20BQ86Y33 519 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 TREML1Q86YW5 311 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 OR10A6Q8NH74 314 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 LRRC58Q96CX6 371 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 POLDIP3Q9BY77 421 aaKnown RBP16.17■□□□□ 0.18
DDX39A-212ENST00000590260 KLHL4Q9C0H6 718 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 CLEC4MQ9H2X3 399 aaPredicted RBP16.17■□□□□ 0.18
DDX39A-212ENST00000590260 TMEM181Q9P2C4 612 aa16.17■□□□□ 0.18
DDX39A-212ENST00000590260 LIPT2A6NK58 231 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 ZNF724A8MTY0 619 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 C16orf97H3BN30 126 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 MRASO14807 208 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 DNPH1O43598 174 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 UQCRBP14927 111 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 FPR1P21462 350 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 FKBP2P26885 142 aaKnown RBP16.16■□□□□ 0.18
DDX39A-212ENST00000590260 OR3A2P47893 321 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 KCNJ5P48544 419 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 P2RY4P51582 365 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 SLC16A1P53985 500 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 OR2B6P58173 313 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 RBBP4Q09028 425 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 PDK3Q15120 406 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 POU4F3Q15319 338 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 NPTX1Q15818 432 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 DUSP7Q16829 419 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 CYP51A1Q16850 503 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 LURAP1LQ8IV03 231 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 POU5F2Q8N7G0 328 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 LSMEM1Q8N8F7 131 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 SMYD1Q8NB12 490 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 C11orf65Q8NCR3 313 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 OR4D11Q8NGI4 311 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 DDIT4LQ96D03 193 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 PTDSS2Q9BVG9 487 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 POTEKPQ9BYX7 375 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 PIF1Q9H611 641 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 KLHL9Q9P2J3 617 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 GMPR2Q9P2T1 348 aaKnown RBP16.16■□□□□ 0.18
DDX39A-212ENST00000590260 PRDM4Q9UKN5 801 aa16.16■□□□□ 0.18
DDX39A-212ENST00000590260 IGKV1D-42A0A075B6H8 117 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 M0QX08 132 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 CD247P20963 164 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 CXCR1P25024 350 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 ADSLP30566 484 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-212ENST00000590260 DNAJA1P31689 397 aaKnown RBP16.15■□□□□ 0.18
DDX39A-212ENST00000590260 PCGF2P35227 344 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 CEACAM7Q14002 265 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 C6orf89Q6UWU4 347 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 BEND4Q6ZU67 534 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 TSPYL5Q86VY4 417 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-212ENST00000590260 CXorf67Q86X51 503 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-212ENST00000590260 TAMM41Q96BW9 452 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 PLEKHF2Q9H8W4 249 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 C6orf203Q9P0P8 240 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-212ENST00000590260 ANGPT4Q9Y264 503 aa16.15■□□□□ 0.18
DDX39A-212ENST00000590260 CAPN7Q9Y6W3 813 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms