RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 VPS26BQ4G0F5 336 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 COQ5Q5HYK3 327 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SPANXN4Q5MJ08 99 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SHQ1Q6PI26 577 aaKnown RBP5.32□□□□□ -1.56
VPS25-204ENST00000589577 BLOC1S3Q6QNY0 202 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 TMEM108Q6UXF1 575 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SNX32Q86XE0 403 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 ARHGAP24Q8N264 748 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 KRTCAP2Q8N6L1 136 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 ZNF540Q8NDQ6 660 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 OR56A1Q8NGH5 318 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 OR4A15Q8NGL6 344 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 RNF128Q8TEB7 428 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 ABHD3Q8WU67 409 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 OR5P2Q8WZ92 322 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 TMBIM1Q969X1 311 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 TMEM186Q96B77 213 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 ZBTB8AQ96BR9 441 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SLC35A4Q96G79 324 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 EGLN2Q96KS0 407 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 COL21A1Q96P44 957 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 INPP5KQ9BT40 448 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SUCNR1Q9BXA5 334 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 ZNF717Q9BY31 904 aaPredicted RBP5.32□□□□□ -1.56
VPS25-204ENST00000589577 PRRG4Q9BZD6 226 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 SAP130Q9H0E3 1048 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 MMP27Q9H306 513 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 DSN1Q9H410 356 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 EFCAB1Q9HAE3 211 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 GLRX2Q9NS18 164 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 DDX18Q9NVP1 670 aaKnown RBP5.32□□□□□ -1.56
VPS25-204ENST00000589577 HIF1ANQ9NWT6 349 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 TAS2R7Q9NYW3 318 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
VPS25-204ENST00000589577 TAGLN3Q9UI15 199 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 FAF1Q9UNN5 650 aaPredicted RBP5.32□□□□□ -1.56
VPS25-204ENST00000589577 AP3M1Q9Y2T2 418 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 AP4B1Q9Y6B7 739 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
VPS25-204ENST00000589577 TENM2Q9NT68 2774 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR5H1A6NKK0 313 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TTC36A6NLP5 189 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 POM121CA8CG34 1229 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 B4DSR2 109 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TO15178 435 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ACOX3O15254 700 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TSPAN2O60636 221 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 GMNNO75496 209 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 PGM3O95394 542 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 CBX7O95931 251 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 NPPAP01160 153 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 PRB2P02812 416 aaPredicted RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 OPN1LWP04000 364 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 COX4I1P13073 169 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 COX5AP20674 150 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 MDKP21741 143 aaPredicted RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 IGHV1-2P23083 117 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 KRT20P35900 424 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 FEN1P39748 380 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 PRIM2P49643 509 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 NUDT2P50583 147 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ZNF83P51522 516 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TXNL4AP83876 142 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 HPCAP84074 193 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 RIN1Q13671 783 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 PDE7AQ13946 482 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 GANABQ14697 944 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 KRT72Q14CN4 511 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 VAX1Q5SQQ9 334 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TIMM23BQ5SRD1 257 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ATAD3BQ5T9A4 648 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 FAM91A1Q658Y4 838 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR4F3Q6IEY1 312 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ZNF621Q6ZSS3 439 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 Q6ZT83 130 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 DHDDSQ86SQ9 333 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TUSC5Q8IXB3 177 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 CCDC116Q8IYX3 515 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR7G1Q8NGA0 311 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR7A2PQ8NGA2 310 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR4K17Q8NGC6 315 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 OR9I1Q8NGQ6 314 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 JADE3Q92613 823 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ROPN1LQ96C74 230 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 LRRC58Q96CX6 371 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 COQ8BQ96D53 544 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 TMCO6Q96DC7 493 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 FBXO17Q96EF6 278 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 C1GALT1C1Q96EU7 318 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 DTNBP1Q96EV8 351 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 DUX5Q96PT3 197 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 ADOQ96SZ5 270 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 USB1Q9BQ65 265 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 MYLK2Q9H1R3 596 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 LPAR2Q9HBW0 351 aa5.31□□□□□ -1.56
VPS25-204ENST00000589577 THUMPD1Q9NXG2 353 aaKnown RBP5.31□□□□□ -1.56
VPS25-204ENST00000589577 TAS2R9Q9NYW1 312 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms