RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 NAA11Q9BSU3 229 aaPredicted RBP12.43□□□□□ -0.42
ERCC1-205ENST00000587888 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
ERCC1-205ENST00000587888 POLE3Q9NRF9 147 aa12.43□□□□□ -0.42
ERCC1-205ENST00000587888 TMEM181Q9P2C4 612 aa12.43□□□□□ -0.42
ERCC1-205ENST00000587888 MARCOQ9UEW3 520 aaPredicted RBP12.43□□□□□ -0.42
ERCC1-205ENST00000587888 CADP27708 2225 aa12.43□□□□□ -0.42
ERCC1-205ENST00000587888 A0A096LNT2 108 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 PRAMEF27A3QJZ7 478 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 AP3D1O14617 1153 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 CDH2P19022 906 aaPredicted RBP12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ETV4P43268 484 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 KHKP50053 298 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 SLC16A1P53985 500 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 NME5P56597 212 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ABCE1P61221 599 aaKnown RBP12.42□□□□□ -0.42
ERCC1-205ENST00000587888 SLC35A1P78382 337 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 HPCAP84074 193 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
ERCC1-205ENST00000587888 CHI3L2Q15782 390 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 SYPL1Q16563 259 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 SAXO2Q658L1 398 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 DDIT4LQ96D03 193 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ROPN1BQ9BZX4 212 aaPredicted RBP12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ROPN1Q9HAT0 212 aaPredicted RBP12.42□□□□□ -0.42
ERCC1-205ENST00000587888 SLC7A10Q9NS82 523 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 PARPBPQ9NWS1 579 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 MALT1Q9UDY8 824 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 TRAPPC4Q9Y296 219 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 TMED7Q9Y3B3 224 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ALPK2Q86TB3 2170 aa12.42□□□□□ -0.42
ERCC1-205ENST00000587888 ABCA1O95477 2261 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ELOA3DA6NLF2 546 aaPredicted RBP12.41□□□□□ -0.42
ERCC1-205ENST00000587888 HMGN4O00479 90 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 DNPH1O43598 174 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 TYROBPO43914 113 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 LY6HO94772 140 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 GUSBP08236 651 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 MYZAPP0CAP1 466 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 IMPDH2P12268 514 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 TACR3P29371 465 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 S100A3P33764 101 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 HTR3AP46098 478 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 POLR2HP52434 150 aaKnown RBP12.41□□□□□ -0.42
ERCC1-205ENST00000587888 H3F3AP84243 136 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 PLAURQ03405 335 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 CHRNB3Q05901 458 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 CASP8Q14790 479 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ELOA3BQ3SY89 546 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 SPANXN4Q5MJ08 99 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 TSPO2Q5TGU0 170 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 AP1ARQ63HQ0 302 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ZNF544Q6NX49 715 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 RNF130Q86XS8 419 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ANKFN1Q8N957 763 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ELOA3Q8NG57 546 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 NANOS1Q8WY41 292 aaKnown RBP12.41□□□□□ -0.42
ERCC1-205ENST00000587888 PMM1Q92871 262 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 NEURL3Q96EH8 262 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 C20orf27Q9GZN8 174 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 FKRPQ9H9S5 495 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
ERCC1-205ENST00000587888 SLC17A5Q9NRA2 495 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 OSGIN1Q9UJX0 560 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 FLVCR1Q9Y5Y0 555 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 PMF1-BGLAPU3KQ54 211 aa12.41□□□□□ -0.42
ERCC1-205ENST00000587888 ZC3H12DA2A288 527 aaKnown RBP12.4□□□□□ -0.42
ERCC1-205ENST00000587888 PDLIM1O00151 329 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 KLF11O14901 512 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 PHF1O43189 567 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-205ENST00000587888 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
ERCC1-205ENST00000587888 SERPINE1P05121 402 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 FAM157CP0CG43 387 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 BMP4P12644 408 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 SLC25A16P16260 332 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 APOBEC3AP31941 199 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-205ENST00000587888 RPL14P50914 215 aaKnown RBP12.4□□□□□ -0.42
ERCC1-205ENST00000587888 EFNA4P52798 201 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 VSNL1P62760 191 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 VLDLRP98155 873 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 SLC25A3Q00325 362 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 SLC17A1Q14916 467 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 FAM174BQ3ZCQ3 159 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 OIT3Q8WWZ8 545 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 TESCQ96BS2 214 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 ZIM3Q96PE6 472 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 NUF2Q9BZD4 464 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 DCTN4Q9UJW0 460 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 CDC42EP3Q9UKI2 254 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 MOKQ9UQ07 419 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 SLC9A8Q9Y2E8 581 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 AMDHD2Q9Y303 409 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 RAP2CQ9Y3L5 183 aa12.4□□□□□ -0.42
ERCC1-205ENST00000587888 FBN3Q75N90 2809 aa12.39□□□□□ -0.43
ERCC1-205ENST00000587888 CCDC154A6NI56 674 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms