RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 UBAP1Q9NZ09 502 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 KCNN3Q9UGI6 736 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TESQ9UGI8 421 aaKnown RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 TMEFF2Q9UIK5 374 aaPredicted RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 ST6GALNAC2Q9UJ37 374 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 ZNF443Q9Y2A4 671 aaPredicted RBP7.12□□□□□ -1.27
VMP1-204ENST00000587259 CLDN16Q9Y5I7 305 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 GMPPBQ9Y5P6 360 aa7.12□□□□□ -1.27
VMP1-204ENST00000587259 TRIM64A6NGJ6 449 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 AGAP5A6NIR3 686 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 OR6C76A6NM76 312 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 DIRAS1O95057 198 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 OR5F1O95221 314 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 IFNA16P05015 189 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ACP2P11117 423 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 NID1P14543 1247 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ENDOUP21128 410 aaKnown RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 ACVR2AP27037 513 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 MAP3K8P41279 467 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 DAPP51397 102 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 SSR4P51571 173 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 GPR143P51810 404 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ADAM8P78325 824 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ID2Q02363 134 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 CHRNEQ04844 493 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 FUT7Q11130 342 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 NPRL3Q12980 569 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TRAM2Q15035 370 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 EXOC3L2Q2M3D2 409 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TRMT12Q53H54 448 aaKnown RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 FGD3Q5JSP0 725 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TYW3Q6IPR3 259 aaKnown RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 DEF8Q6ZN54 512 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 FRRS1Q6ZNA5 592 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 RRM2BQ7LG56 351 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TMEM179BQ7Z7N9 219 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TMEM251Q8N6I4 163 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ZNF527Q8NB42 609 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 POGLUT1Q8NBL1 392 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 SLC16A11Q8NCK7 471 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 WFDC11Q8NEX6 87 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 B3GNT7Q8NFL0 401 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 OR52R1Q8NGF1 315 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 VANGL1Q8TAA9 524 aaPredicted RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 SLC35A4Q96G79 324 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 C16orf58Q96GQ5 468 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 HRASLS5Q96KN8 279 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 MUS81Q96NY9 551 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 MBOAT4Q96T53 435 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 FEVQ99581 238 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 FOXC2Q99958 501 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 YIPF4Q9BSR8 244 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 TEX12Q9BXU0 123 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 DGCR6LQ9BY27 220 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 HOXD1Q9GZZ0 328 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 RIBC2Q9H4K1 309 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 NMNAT1Q9HAN9 279 aaPredicted RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 FOLH1BQ9HBA9 442 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ACER3Q9NUN7 267 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 HPF1Q9NWY4 346 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 SCN3BQ9NY72 215 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 VNN3Q9NY84 501 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 CRIM1Q9NZV1 1036 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 COPS7AQ9UBW8 275 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 NDRG4Q9ULP0 352 aaKnown RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 RPH3AQ9Y2J0 694 aaPredicted RBP7.11□□□□□ -1.27
VMP1-204ENST00000587259 TPRKBQ9Y3C4 175 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 CLCA3PQ9Y6N3 262 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 MPDZO75970 2070 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 EML6Q6ZMW3 1958 aa7.11□□□□□ -1.27
VMP1-204ENST00000587259 ABCA2Q9BZC7 2435 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 HEATR5AQ86XA9 2040 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 PRAMEF27A3QJZ7 478 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 C17orf105B2RV13 164 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 OR10H3O60404 316 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 NME6O75414 186 aaPredicted RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 CBX7O95931 251 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 GNAO1P09471 354 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 RFPL3SP0C7P2 107 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 SMIM18P0DKX4 95 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 CCL3P10147 92 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 TNNI3P19429 210 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 CBLP22681 906 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 UQCRC1P31930 480 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 GABRA3P34903 492 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 PIGAP37287 484 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 AGFG1P52594 562 aaKnown RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 CDC42P60953 191 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 IL5RAQ01344 420 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 IL1RL1Q01638 556 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 MGAT2Q10469 447 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 GANABQ14697 944 aaKnown RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.1□□□□□ -1.27
VMP1-204ENST00000587259 ZIK1Q3SY52 487 aaPredicted RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 CYP27C1Q4G0S4 372 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 FLYWCH1Q4VC44 716 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ARSKQ6UWY0 536 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms