RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 MBD3L2Q8NHZ7 208 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 STK35Q8TDR2 534 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 OSTF1Q92882 214 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CPNE4Q96A23 557 aaPredicted RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CCDC120Q96HB5 630 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 PYURFQ96I23 114 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 MPP4Q96JB8 637 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 ZFP3Q96NJ6 502 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 CADM1Q9BY67 442 aaKnown RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 TRIM15Q9C019 465 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 OR11A1Q9GZK7 315 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 COQ10BQ9H8M1 238 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 MCTS1Q9ULC4 181 aaKnown RBP17.2■□□□□ 0.34
DDX39A-204ENST00000586558 TRAPPC4Q9Y296 219 aa17.2■□□□□ 0.34
DDX39A-204ENST00000586558 A0A087WUJ7 227 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 CLEC18AA5D8T8 446 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 SEMA7AO75326 666 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 AGFG2O95081 481 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 OR5F1O95221 314 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 PMS2P2O95744 297 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 THRBP10828 461 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 ATP6V1B2P21281 511 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 SMSP52788 366 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 CDH12P55289 794 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 NUP107P57740 925 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 RAC3P60763 192 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 PMPCAQ10713 525 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 MYBPHQ13203 477 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 PON3Q15166 354 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 CLEC18BQ6UXF7 455 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 CYP2R1Q6VVX0 501 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 MARVELD2Q8N4S9 558 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 FAM26EQ8N5C1 309 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 CLEC18CQ8NCF0 446 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 RND1Q92730 232 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 PRRC1Q96M27 445 aa17.19■□□□□ 0.34
DDX39A-204ENST00000586558 A0A1W2PNR3 127 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 SULT2B1O00204 365 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ACOT8O14734 319 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 NPIPB7O75200 414 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 IDUAP35475 653 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 DIO1P49895 249 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 TAS2R41P59536 307 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 MS4A2Q01362 244 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ZNF239Q16600 458 aaKnown RBP17.18■□□□□ 0.34
DDX39A-204ENST00000586558 OR2A2Q6IF42 318 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 SEM1Q6ZVN7 128 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 CYP4Z1Q86W10 505 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 FAM86B1Q8N7N1 296 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 FNDC9Q8TBE3 224 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 RNF217Q8TC41 542 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ZHX1-C8orf76Q96EF9 292 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 SLC41A3Q96GZ6 507 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ZNF845Q96IR2 970 aaPredicted RBP17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ARL5BQ96KC2 179 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 LRGUKQ96M69 825 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 TMEM43Q9BTV4 400 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 AMBRA1Q9C0C7 1298 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 ENPP4Q9Y6X5 453 aa17.18■□□□□ 0.34
DDX39A-204ENST00000586558 LRRK2Q5S007 2527 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 USP9XQ93008 2570 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-204ENST00000586558 ZC3H12DA2A288 527 aaKnown RBP17.17■□□□□ 0.34
DDX39A-204ENST00000586558 HSPB2A8KAH6 182 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 LYPD3O95274 346 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 AHSA1O95433 338 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 IL2RAP01589 272 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 ITGA2P17301 1181 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 CEACAM8P31997 349 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-204ENST00000586558 GABPB1Q06547 395 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-204ENST00000586558 HSPB2Q16082 182 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 C1orf140Q5VVS0 124 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 LINC00114Q6XXX2 140 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 P4HA3Q7Z4N8 544 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 TSPYL5Q86VY4 417 aaPredicted RBP17.17■□□□□ 0.34
DDX39A-204ENST00000586558 C7orf34Q96L11 122 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 EPYCQ99645 322 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 PRRG4Q9BZD6 226 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 COQ3Q9NZJ6 369 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 RIMS3Q9UJD0 308 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 SLC7A7Q9UM01 511 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 TENM4Q6N022 2769 aa17.17■□□□□ 0.34
DDX39A-204ENST00000586558 IGKV1D-42A0A075B6H8 117 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 KDM4EB2RXH2 506 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-204ENST00000586558 OR2T1O43869 369 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 EIF1BO60739 113 aaKnown RBP17.16■□□□□ 0.34
DDX39A-204ENST00000586558 TGM6O95932 706 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 LDLRP01130 860 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 THY1P04216 161 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 SEMG1P04279 462 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 CRHP06850 196 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 HOXB6P17509 224 aaKnown RBP17.16■□□□□ 0.34
DDX39A-204ENST00000586558 AGAP20933 346 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 SLC35A1P78382 337 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 ADORA2A-AS1P86434 159 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 EGR4Q05215 589 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 ST3GAL3Q11203 375 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 PIN1Q13526 163 aaPredicted RBP17.16■□□□□ 0.34
DDX39A-204ENST00000586558 FLOT2Q14254 428 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 ASRGL1Q7L266 308 aa17.16■□□□□ 0.34
DDX39A-204ENST00000586558 GDF7Q7Z4P5 450 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms