RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IL2RGP31785 369 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 SOAT1P35610 550 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 RPL3P39023 403 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 OR2B6P58173 313 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CHRNB3Q05901 458 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 ZSWIM7Q19AV6 140 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CR1LQ2VPA4 569 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 ATP6AP1LQ52LC2 224 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 HIKESHIQ53FT3 197 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CASP12Q6UXS9 341 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 ZCCHC23Q6ZST2 131 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 EIF3MQ7L2H7 374 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 GRINAQ7Z429 371 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 C17orf78Q8N4C9 275 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 MNS1Q8NEH6 495 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 EPS8L3Q8TE67 593 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 CNOT9Q92600 299 aaKnown RBP10.36□□□□□ -0.75
BRCA1-225ENST00000586385 C3orf49Q96BT1 292 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 BOD1Q96IK1 185 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 OR51I1Q9H343 314 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 SEC61A2Q9H9S3 476 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 FKRPQ9H9S5 495 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 ATAD3AQ9NVI7 634 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 SLC17A7Q9P2U7 560 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 AMDHD2Q9Y303 409 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 PMF1-BGLAPU3KQ54 211 aa10.36□□□□□ -0.75
BRCA1-225ENST00000586385 IGHV1-18A0A0C4DH31 117 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 RNF103-CHMP3A0A140T963 221 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 LRP5LA4QPB2 252 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 SMIM23A6NLE4 172 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 NDUFS8O00217 210 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 KLF11O14901 512 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 CFLARO15519 480 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 WIPF1O43516 503 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 NPHS1O60500 1241 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 TGFAP01135 160 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 GUSBP08236 651 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 IGFBP1P08833 259 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-225ENST00000586385 OR12D1P0DN82 309 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 APEHP13798 732 aaKnown RBP10.35□□□□□ -0.75
BRCA1-225ENST00000586385 ZNF23P17027 643 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 PRPS1L1P21108 318 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 MAPK1P28482 360 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 CLK1P49759 484 aaKnown RBP10.35□□□□□ -0.75
BRCA1-225ENST00000586385 LGALS3BPQ08380 585 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 IFT20Q8IY31 132 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 NATD1Q8N6N6 113 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 FNDC5Q8NAU1 212 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 RAB8BQ92930 207 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 ZHX1-C8orf76Q96EF9 292 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 SLC35G5Q96KT7 338 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 ZNF385AQ96PM9 386 aaKnown RBP10.35□□□□□ -0.75
BRCA1-225ENST00000586385 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 BPESC1Q9GZL8 116 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 TMEM181Q9P2C4 612 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 ZDHHC2Q9UIJ5 367 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 OSGIN1Q9UJX0 560 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 TRAPPC4Q9Y296 219 aa10.35□□□□□ -0.75
BRCA1-225ENST00000586385 TMED7-TICAM2A0A0A6YYA0 188 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 LOC390937A0A1W2PQ73 354 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 DUXAA6NLW8 204 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 ANKRD28O15084 1053 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 SKAP2O75563 359 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-225ENST00000586385 PGRP06401 933 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 MPGP29372 298 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 MAGEA8P43361 318 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 IDH2P48735 452 aaKnown RBP10.34□□□□□ -0.75
BRCA1-225ENST00000586385 P2RY4P51582 365 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 CLDN8P56748 225 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 PRPS1P60891 318 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 ADIPOQQ15848 244 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 PGS1Q32NB8 556 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 TNFAIP8L2Q6P589 184 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-225ENST00000586385 LINGO2Q7L985 606 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 C16orf62Q7Z3J2 963 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 CNPY4Q8N129 248 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 ZNF563Q8TA94 476 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 TMEM45BQ96B21 275 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 ROPN1LQ96C74 230 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
BRCA1-225ENST00000586385 MKS1Q9NXB0 559 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 SLC35A3Q9Y2D2 325 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 SLC9A8Q9Y2E8 581 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 TMED7Q9Y3B3 224 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 WDR45Q9Y484 360 aa10.34□□□□□ -0.75
BRCA1-225ENST00000586385 SPIN1Q9Y657 262 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-225ENST00000586385 RNASET2O00584 256 aaKnown RBP10.33□□□□□ -0.76
BRCA1-225ENST00000586385 LILRA1O75019 489 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 BMP4P12644 408 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 CALCRP30988 508 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 SERPINF1P36955 418 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 SLC35A1P78382 337 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 KCNJ10P78508 379 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 CARTPTQ16568 116 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 SAXO2Q658L1 398 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 PAQR6Q6TCH4 344 aa10.33□□□□□ -0.76
BRCA1-225ENST00000586385 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms