RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 OR4F3Q6IEY1 312 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 EMBQ6PCB8 327 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 ZCCHC23Q6ZST2 131 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 C17orf78Q8N4C9 275 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 ARIH2OSQ8N7S6 290 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 C1orf162Q8NEQ5 155 aaPredicted RBP12.67□□□□□ -0.38
SDF2-202ENST00000585428 OR8J2Q8NGG1 315 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 ZNF563Q8TA94 476 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 TUBGCP3Q96CW5 907 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 APOPT1Q96IL0 206 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 SHARPINQ9H0F6 387 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 FKRPQ9H9S5 495 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 EXOSC3Q9NQT5 275 aaKnown RBP12.67□□□□□ -0.38
SDF2-202ENST00000585428 SLC17A5Q9NRA2 495 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 ASIC5Q9NY37 505 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 TMEM181Q9P2C4 612 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 FLVCR1Q9Y5Y0 555 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 ATP23Q9Y6H3 246 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 PMF1-BGLAPU3KQ54 211 aa12.67□□□□□ -0.38
SDF2-202ENST00000585428 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 CLDN24A6NM45 220 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 LY6HO94772 140 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 CSF3P09919 207 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 RYKP34925 604 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 SOAT1P35610 550 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 IDH2P48735 452 aaKnown RBP12.66□□□□□ -0.38
SDF2-202ENST00000585428 OR2B6P58173 313 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 FUT5Q11128 374 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 MAD2L1Q13257 205 aaPredicted RBP12.66□□□□□ -0.38
SDF2-202ENST00000585428 TSPO2Q5TGU0 170 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 C16orf62Q7Z3J2 963 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 ZIC4Q8N9L1 334 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 TCP10LQ8TDR4 215 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 PMM1Q92871 262 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 ROPN1LQ96C74 230 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.66□□□□□ -0.38
SDF2-202ENST00000585428 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
SDF2-202ENST00000585428 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 PRSS51A0A1B0GVH4 220 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 TLDC2A0PJX2 215 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 ZNF208O43345 1280 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 EIF1BO60739 113 aaKnown RBP12.65□□□□□ -0.38
SDF2-202ENST00000585428 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
SDF2-202ENST00000585428 IMPDH2P12268 514 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 UQCRC2P22695 453 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 HTR3AP46098 478 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 SLC35A1P78382 337 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 TGFBR3Q03167 851 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 SAXO2Q658L1 398 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 ARFGAP2Q8N6H7 521 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 RAB8BQ92930 207 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 SLC35G5Q96KT7 338 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 NOP53Q9NZM5 478 aaKnown RBP12.65□□□□□ -0.38
SDF2-202ENST00000585428 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 OSGIN1Q9UJX0 560 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 PCDHGB4Q9UN71 923 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 AMDHD2Q9Y303 409 aa12.65□□□□□ -0.38
SDF2-202ENST00000585428 YLPM1P49750 1951 aaKnown RBP12.64□□□□□ -0.39
SDF2-202ENST00000585428 TMED7-TICAM2A0A0A6YYA0 188 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 SLC35F4A4IF30 521 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 SPAG7O75391 227 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 BPGMP07738 259 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 CCNA2P20248 432 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 MPGP29372 298 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 NR4A2P43354 598 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 GZMKP49863 264 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 MAP2K6P52564 334 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 PRPS1P60891 318 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 ATAD3BQ5T9A4 648 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 TNFAIP8L2Q6P589 184 aaPredicted RBP12.64□□□□□ -0.39
SDF2-202ENST00000585428 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 CNOT9Q92600 299 aaKnown RBP12.64□□□□□ -0.39
SDF2-202ENST00000585428 NEURL3Q96EH8 262 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 FOXN4Q96NZ1 517 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 NAA11Q9BSU3 229 aaPredicted RBP12.64□□□□□ -0.39
SDF2-202ENST00000585428 PRR14Q9BWN1 585 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 ADAM19Q9H013 955 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 MOKQ9UQ07 419 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 SLC9A8Q9Y2E8 581 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 TMED7Q9Y3B3 224 aa12.64□□□□□ -0.39
SDF2-202ENST00000585428 NUP214P35658 2090 aaPredicted RBP12.64□□□□□ -0.39
SDF2-202ENST00000585428 TMEM72A0PK05 275 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 NDUFS8O00217 210 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 FAAHO00519 579 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 C1QCP02747 245 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 NUDT17P0C025 328 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 IGFBP5P24593 272 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 SLC1A3P43003 542 aa12.63□□□□□ -0.39
SDF2-202ENST00000585428 ETV4P43268 484 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms