RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CCDC134Q9H6E4 229 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 A4GALTQ9NPC4 353 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 TRIM33Q9UPN9 1127 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 CORO2BQ9UQ03 480 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 NOSIPQ9Y314 301 aaKnown RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 PRRC2AP48634 2157 aaKnown RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 DSPPQ9NZW4 1301 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 A0A1W2PPR1 153 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 EVPLLA8MZ36 301 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ADAM11O75078 769 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GCM2O75603 506 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 THBDP07204 575 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GKN3PP0CG01 181 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 GNGT1P63211 74 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 SLC35A1P78382 337 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 PLAURQ03405 335 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 CAPRIN1Q14444 709 aaKnown RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 MAPK11Q15759 364 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ZNF311Q5JNZ3 666 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 RPS26P11Q5JNZ5 115 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 GCNT6Q5T4J0 391 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 WBP2NLQ6ICG8 309 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ZNF836Q6ZNA1 936 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 BHLHA15Q7RTS1 189 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 SSX8Q7RTT4 187 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 DNAJA3Q96EY1 480 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 ZNF300Q96RE9 604 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 CCL19Q99731 98 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 SPATA9Q9BWV2 254 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 RLIMQ9NVW2 624 aa10.99□□□□□ -0.65
SS18-225ENST00000585121 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.99□□□□□ -0.65
SS18-225ENST00000585121 IGKV3D-15A0A087WSY6 115 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.98□□□□□ -0.65
SS18-225ENST00000585121 TMEM72A0PK05 275 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 ARHGEF9O43307 516 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 KLF4O43474 513 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 SMPD2O60906 423 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 CNOT4O95628 575 aaKnown RBP10.98□□□□□ -0.65
SS18-225ENST00000585121 LSP1P33241 339 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 LRIF1Q5T3J3 769 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 C22orf34Q6ZV56 151 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 KRT73Q86Y46 540 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 P3H2Q8IVL5 708 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 FUNDC1Q8IVP5 155 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 UBE2J2Q8N2K1 259 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 STON2Q8WXE9 905 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 APH1AQ96BI3 265 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 MUCL1Q96DR8 90 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 PLPPR2Q96GM1 343 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 SIKE1Q9BRV8 207 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 SPATA5L1Q9BVQ7 753 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 TAPBPLQ9BX59 468 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 POTEKPQ9BYX7 375 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 ADAM19Q9H013 955 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 ESRP2Q9H6T0 727 aaKnown RBP10.98□□□□□ -0.65
SS18-225ENST00000585121 BCL2L10Q9HD36 194 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 PARPBPQ9NWS1 579 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 ING1Q9UK53 422 aaPredicted RBP10.98□□□□□ -0.65
SS18-225ENST00000585121 MTORP42345 2549 aa10.98□□□□□ -0.65
SS18-225ENST00000585121 ZNF814B7Z6K7 855 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 MRPL33O75394 65 aaKnown RBP10.97□□□□□ -0.65
SS18-225ENST00000585121 GPIP06744 558 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 NUDT7P0C024 238 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 BMP2P12643 396 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 ETS2P15036 469 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 KLK2P20151 261 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 IDUAP35475 653 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 ZNF704Q6ZNC4 412 aaPredicted RBP10.97□□□□□ -0.65
SS18-225ENST00000585121 CLIP4Q8N3C7 705 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 MAL2Q969L2 176 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 PIP5K1AQ99755 562 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 RPS6KB2Q9UBS0 482 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 PRSS50Q9UI38 385 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
SS18-225ENST00000585121 MED13LQ71F56 2210 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 A0A1W2PP18 115 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 GMNCA6NCL1 334 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 ZNF716A6NP11 495 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 A8MVM7 634 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 LYZL6O75951 148 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 PGM3O95394 542 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 GGT1P19440 569 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 ACAA2P42765 397 aaKnown RBP10.96□□□□□ -0.65
SS18-225ENST00000585121 SLC16A1P53985 500 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 NKX6-1P78426 367 aaPredicted RBP10.96□□□□□ -0.65
SS18-225ENST00000585121 STK11Q15831 433 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 PAGE3Q5JUK9 113 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 SHEQ5VZ18 495 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 FBXW9Q5XUX1 488 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 REEP3Q6NUK4 255 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 PAQR6Q6TCH4 344 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 P2RY8Q86VZ1 359 aa10.96□□□□□ -0.65
SS18-225ENST00000585121 CCDC103Q8IW40 242 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms