RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 CHERPQ8IWX8 916 aaKnown RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 OSTF1Q92882 214 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 CPNE4Q96A23 557 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 PRR14Q9BWN1 585 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 POLR2J2Q9GZM3 115 aaKnown RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 POLR2J3Q9H1A7 115 aaKnown RBP12.47□□□□□ -0.41
TRAF4-215ENST00000584944 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 CHST2Q9Y4C5 530 aa12.47□□□□□ -0.41
TRAF4-215ENST00000584944 ETV2O00321 342 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ADAMDEC1O15204 470 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 GSC2O15499 205 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 CXCL13O43927 109 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 TPST2O60704 377 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 EPPINO95925 133 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 GPIP06744 558 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 PSMA4P25789 261 aaKnown RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 HTR2AP28223 471 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 IDUAP35475 653 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 OR2B6P58173 313 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 SLC35A1P78382 337 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 PLAURQ03405 335 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 GABPB1Q06547 395 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 PON3Q15166 354 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 FAM98BQ52LJ0 330 aaKnown RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 EMC4Q5J8M3 183 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 TTC33Q6PID6 262 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 RRM2BQ7LG56 351 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 COMTD1Q86VU5 262 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ADGRG3Q86Y34 549 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 WNT2BQ93097 391 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 C3orf49Q96BT1 292 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 SLC7A6OSQ96CW6 309 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 PYURFQ96I23 114 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 NPAS1Q99742 590 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 OR11A1Q9GZK7 315 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 LRMDAQ9H2I8 198 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 C12orf10Q9HB07 376 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.46□□□□□ -0.41
TRAF4-215ENST00000584944 SLC7A7Q9UM01 511 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF175Q9Y473 711 aa12.46□□□□□ -0.41
TRAF4-215ENST00000584944 ZNF407Q9C0G0 2248 aa12.46□□□□□ -0.42
TRAF4-215ENST00000584944 ABCA12Q86UK0 2595 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 NCKAP5O14513 1909 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 A0A0J9YW62 118 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 A0A1B0GX12 115 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 A0A1W2PNR3 127 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM72A0PK05 275 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CD8B2A6NJW9 211 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 HSPB2A8KAH6 182 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 H0YC42 278 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CHP2O43745 196 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 OR5F1O95221 314 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 ENPP1P22413 925 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 YAP1P46937 504 aaKnown RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 DIO1P49895 249 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CRYBA2P53672 197 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CDH12P55289 794 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 NUP107P57740 925 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 CHRNB3Q05901 458 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 ST3GAL3Q11203 375 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 MYBPHQ13203 477 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 HSPB2Q16082 182 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 C1orf140Q5VVS0 124 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 ATG4DQ86TL0 474 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 GGNQ86UU5 652 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 SPATA24Q86W54 205 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 PHF10Q8WUB8 498 aaKnown RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 SLC38A4Q969I6 547 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 SLC25A36Q96CQ1 311 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 RSRC1Q96IZ7 334 aaKnown RBP12.45□□□□□ -0.42
TRAF4-215ENST00000584944 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 PRRC1Q96M27 445 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 SEPHS2Q99611 448 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 RIMS3Q9UJD0 308 aa12.45□□□□□ -0.42
TRAF4-215ENST00000584944 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 OR2T1O43869 369 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 EIF1BO60739 113 aaKnown RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 FABP3P05413 133 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 GLI4P10075 376 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 THRBP10828 461 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms