RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 THSD1Q9NS62 852 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 RPL36Q9Y3U8 105 aaKnown RBP9.42□□□□□ -0.9
RFFL-212ENST00000584655 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 SERINC4A6NH21 518 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 TMCC2O75069 709 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 COQ9O75208 318 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 MPZL1O95297 269 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 KEAP1Q14145 624 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 CTF1Q16619 201 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 SPATS1Q496A3 300 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 PRSS48Q7RTY5 328 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 GPR155Q7Z3F1 870 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 MORN4Q8NDC4 146 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 OR6C4Q8NGE1 309 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 TM9SF4Q92544 642 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 DIRAS2Q96HU8 199 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 DMRTB1Q96MA1 342 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 HS6ST2Q96MM7 605 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 GPN3Q9UHW5 284 aaPredicted RBP9.42□□□□□ -0.9
RFFL-212ENST00000584655 ADAMTS9Q9P2N4 1935 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 ZNF318Q5VUA4 2279 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 ACOD1A6NK06 481 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 LOC110117498-PIK3R3F6TDL0 507 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 OR8G3PP0DMU2 310 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 TCN2P20062 427 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 STAT5AP42229 794 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 FASLGP48023 281 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 TRA2BP62995 288 aaKnown RBP9.42□□□□□ -0.9
RFFL-212ENST00000584655 E2F1Q01094 437 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 NCCRP1Q6ZVX7 275 aaPredicted RBP9.42□□□□□ -0.9
RFFL-212ENST00000584655 MDGA2Q7Z553 956 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 LAX1Q8IWV1 398 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 NT5CQ8TCD5 201 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 C4orf36Q96KX1 117 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 DUSP21Q9H596 190 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
RFFL-212ENST00000584655 BRINP1O60477 761 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 NSA2O95478 260 aaKnown RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 OXSR1O95747 527 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 UBL4AP11441 157 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 BMP4P12644 408 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 PCMT1P22061 227 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 EPHA8P29322 1005 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 TTKP33981 857 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 RPS19P39019 145 aaKnown RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 BCAP31P51572 246 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 EMP3P54852 163 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ELOAQ14241 798 aaKnown RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 PGGHGQ32M88 737 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ARHGAP11BQ3KRB8 267 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 RSBN1Q5VWQ0 802 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 KRT74Q7RTS7 529 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ARL5BQ96KC2 179 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 LPAR4Q99677 370 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 IGHV5-10-1A0A0J9YXX1 117 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 A0A1B0GX78 115 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 A0A1W2PRQ8 180 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 TMEM72A0PK05 275 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 SPARCP09486 303 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 KLK2P20151 261 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 CCKBRP32239 447 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 OR10A3P58181 314 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 FOXK2Q01167 660 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 MGAT2Q10469 447 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 PRTGQ2VWP7 1150 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 FAM131AQ6UXB0 335 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SLC36A4Q6YBV0 504 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 GLCCI1Q86VQ1 547 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SAMD14Q8IZD0 417 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 HSD17B8Q92506 261 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SLC39A1Q9NY26 324 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ENPP5Q9UJA9 477 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SEMG1P04279 462 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 HLA-DOBP13765 273 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ABCD3P28288 659 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 RCVRNP35243 200 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 E2F2Q14209 437 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 NR0B2Q15466 257 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 ZNF829Q3KNS6 432 aaPredicted RBP9.41□□□□□ -0.9
RFFL-212ENST00000584655 PYDC2Q56P42 97 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SSX6Q7RTT6 188 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 SLC22A16Q86VW1 577 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 JAZF1Q86VZ6 243 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 C9orf40Q8IXQ3 194 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 DNAAF1Q8NEP3 725 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 HMG20AQ9NP66 347 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 TMEM45AQ9NWC5 275 aa9.41□□□□□ -0.9
RFFL-212ENST00000584655 PLOD3O60568 738 aa9.4□□□□□ -0.9
RFFL-212ENST00000584655 AKR7A3O95154 331 aa9.4□□□□□ -0.9
RFFL-212ENST00000584655 ATP1B1P05026 303 aa9.4□□□□□ -0.9
RFFL-212ENST00000584655 OMPP47874 163 aa9.4□□□□□ -0.9
RFFL-212ENST00000584655 ATP12AP54707 1039 aa9.4□□□□□ -0.9
RFFL-212ENST00000584655 STARD6P59095 220 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms